RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CIPCQ9C0C6 399 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 MEAF6Q9HAF1 191 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 UBAP1Q9NZ09 502 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 MPP6Q9NZW5 540 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 CNOT11Q9UKZ1 510 aaKnown RBP14.51□□□□□ -0.09
CCDC43-203ENST00000588210 SARDHQ9UL12 918 aa14.51□□□□□ -0.09
CCDC43-203ENST00000588210 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 GALR2O43603 387 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PMPCBO75439 489 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 C8BP07358 591 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 HNRNPLP14866 589 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RHOQP17081 205 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 MSX2P35548 267 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 CHRNA4P43681 627 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 CXCL12P48061 93 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PLK1P53350 603 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 INHBCP55103 352 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PSME3P61289 254 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 GALNT1Q10472 559 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 LSAMPQ13449 338 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 SLC14A2Q15849 920 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 FAM83EQ2M2I3 478 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RBM20Q5T481 1227 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 NEPROQ6NW34 567 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 SYT13Q7L8C5 426 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RNF148Q8N7C7 305 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 TMEM102Q8N9M5 508 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 IL17RCQ8NAC3 791 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 CALML6Q8TD86 181 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RANBP9Q96S59 729 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 MRPL1Q9BYD6 325 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 ZNF696Q9H7X3 374 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 EML4Q9HC35 981 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RBM22Q9NW64 420 aaKnown RBP eCLIP14.5□□□□□ -0.091e-7■■■■■ 41.1
CCDC43-203ENST00000588210 PCDHGA7Q9Y5G6 932 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 ANTXRLA6NF34 631 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 A8MT66 165 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PAPSS2O95340 614 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 POLR2EP19388 210 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 OR1E1P30953 314 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RPL5P46777 297 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 CREB5Q02930 508 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 STX5Q13190 355 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 SEPT6Q14141 434 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 CSHL1Q14406 222 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PLEKHG6Q3KR16 790 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 FUT11Q495W5 492 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 PITRM1Q5JRX3 1037 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 EOGTQ5NDL2 527 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 AGAP9Q5VTM2 703 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 KDELC1Q6UW63 502 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 GALNT7Q86SF2 657 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 LRRC49Q8IUZ0 686 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 RTL3Q8N8U3 475 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 GABPB2Q8TAK5 448 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 HMGCLL1Q8TB92 370 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 SGF29Q96ES7 293 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 TSPAN17Q96FV3 270 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 OLFM1Q99784 485 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 MRPS26Q9BYN8 205 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 UNKQ9C0B0 810 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 KCNH6Q9H252 994 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 SUDS3Q9H7L9 328 aaPredicted RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 ARNT2Q9HBZ2 717 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 TMEM248Q9NWD8 314 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 HACD3Q9P035 362 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 INTS6Q9UL03 887 aaKnown RBP14.5□□□□□ -0.09
CCDC43-203ENST00000588210 HCN2Q9UL51 889 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 MMP17Q9ULZ9 603 aa14.5□□□□□ -0.09
CCDC43-203ENST00000588210 ZNF318Q5VUA4 2279 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 HEATR9A2RTY3 570 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 NEMP2A6NFY4 417 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 AURKAO14965 403 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 IPO13O94829 963 aaKnown RBP14.49□□□□□ -0.09
CCDC43-203ENST00000588210 TNFAIP8O95379 198 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 KLF8O95600 359 aaPredicted RBP14.49□□□□□ -0.09
CCDC43-203ENST00000588210 RHOCP08134 193 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 CSKP41240 450 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 LEPRP48357 1165 aaKnown RBP14.49□□□□□ -0.09
CCDC43-203ENST00000588210 MAPKAPK2P49137 400 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 LRP8Q14114 963 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 EGFLAMQ63HQ2 1017 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 SDE2Q6IQ49 451 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 ZNF783Q6ZMS7 281 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 TFAP2DQ7Z6R9 452 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 SPATA24Q86W54 205 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 ATP13A1Q9HD20 1204 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 NDFIP2Q9NV92 336 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 THAP10Q9P2Z0 257 aaPredicted RBP14.49□□□□□ -0.09
CCDC43-203ENST00000588210 FBXO4Q9UKT5 387 aa14.49□□□□□ -0.09
CCDC43-203ENST00000588210 H0YJX3 145 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 ASLP04424 464 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 RBP1P09455 135 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 LTA4HP09960 611 aaKnown RBP14.48□□□□□ -0.09
CCDC43-203ENST00000588210 NTSR1P30989 418 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 WNT3AP56704 352 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 REP15Q6BDI9 236 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 KLC3Q6P597 504 aa14.48□□□□□ -0.09
CCDC43-203ENST00000588210 CUZD1Q86UP6 607 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms