RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 SHANK1Q9Y566 2161 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF106Q9H2Y7 1883 aaKnown RBP11.66□□□□□ -0.54
BRCA1-225ENST00000586385 TTLL8A6PVC2 850 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 MTA2O94776 668 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 AGFG2O95081 481 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 SLC4A1P02730 911 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 EBLN1P0CF75 366 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 PTPN4P29074 926 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 CASP14P31944 242 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
BRCA1-225ENST00000586385 TYRO3Q06418 890 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 TUBB3Q13509 450 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 FHL5Q5TD97 284 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 PDPK2PQ6A1A2 396 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 LCN10Q6JVE6 187 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF517Q6ZMY9 492 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-225ENST00000586385 FAM83HQ6ZRV2 1179 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-225ENST00000586385 PLD5Q8N7P1 536 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 SLC38A9Q8NBW4 561 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 ADAMTS17Q8TE56 1095 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 SSC4DQ8WTU2 575 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 IMP4Q96G21 291 aaKnown RBP11.65□□□□□ -0.54
BRCA1-225ENST00000586385 ZDHHC12Q96GR4 267 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 MAP3K3Q99759 626 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 MAGEE1Q9HCI5 957 aa11.65□□□□□ -0.54
BRCA1-225ENST00000586385 PCDHGA9Q9Y5G4 932 aaKnown RBP11.65□□□□□ -0.54
BRCA1-225ENST00000586385 RP1L1Q8IWN7 2480 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-225ENST00000586385 MYO1FO00160 1098 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 GPR39O43194 453 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 VEGFDO43915 354 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 VPS4BO75351 444 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CEACAM4O75871 244 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CDK14O94921 469 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 MX2P20592 715 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 FECHP22830 423 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CTSCP53634 463 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 GPS2Q13227 327 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 NR1I3Q14994 352 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 PDK2Q15119 407 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 NOMO1Q15155 1222 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 ANO6Q4KMQ2 910 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 ATP13A5Q4VNC0 1218 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 PRAMEF17Q5VTA0 474 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 FAM69BQ5VUD6 431 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 B4GALNT4Q76KP1 1039 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 RBM12BQ8IXT5 1001 aaKnown RBP11.64□□□□□ -0.55
BRCA1-225ENST00000586385 KCTD6Q8NC69 237 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CCNYQ8ND76 341 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 CXorf40BQ96DE9 158 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 PPM1MQ96MI6 270 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 FCRL4Q96PJ5 515 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 SLC25A23Q9BV35 468 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 ADGRE3Q9BY15 652 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 GPR87Q9BY21 358 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 BPIFA1Q9NP55 256 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 RARRES3Q9UL19 164 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 VPS4AQ9UN37 437 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 TNRC6AQ8NDV7 1962 aaKnown RBP11.64□□□□□ -0.55
BRCA1-225ENST00000586385 MED13Q9UHV7 2174 aa11.64□□□□□ -0.55
BRCA1-225ENST00000586385 PCSK5Q92824 1860 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 ARGFXA6NJG6 315 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 C3orf70A6NLC5 250 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 PROSCO94903 275 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 MT-CYBP00156 380 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 MT-ND3P03897 115 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 IDSP22304 550 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 PBX1P40424 430 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 PTGIRP43119 386 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 CCL11P51671 97 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 PGDP52209 483 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 CDK18Q07002 472 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 TMEM115Q12893 351 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 MRPL49Q13405 166 aaKnown RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 INPP5JQ15735 1006 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 GPR19Q15760 415 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 RPE65Q16518 533 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 HADHQ16836 314 aaKnown RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 FIGNQ5HY92 759 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 NPNTQ6UXI9 565 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 SYVN1Q86TM6 617 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 D2HGDHQ8N465 521 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 TTC30BQ8N4P2 665 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 RASGEF1AQ8N9B8 481 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 SIDT2Q8NBJ9 832 aaKnown RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 THAP4Q8WY91 577 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 UBXN4Q92575 508 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF514Q96K75 400 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-225ENST00000586385 OLFM3Q96PB7 478 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 RNF157Q96PX1 679 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 ING2Q9H160 280 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 PDE7BQ9NP56 450 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 IL26Q9NPH9 171 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 FGF21Q9NSA1 209 aa11.63□□□□□ -0.55
BRCA1-225ENST00000586385 LUZP4Q9P127 313 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms