RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
SS18-225ENST00000585121 DNMT3AQ9Y6K1 912 aaPredicted RBP12.19□□□□□ -0.46
SS18-225ENST00000585121 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 LILRA5A6NI73 299 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 PRAMEF1O95521 474 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 THRAP10827 490 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 RALBP11234 206 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 MPSTP25325 297 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 HADHAP40939 763 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 VAC14Q08AM6 782 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
SS18-225ENST00000585121 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
SS18-225ENST00000585121 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 GPRC6AQ5T6X5 926 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 TMEM220Q6QAJ8 160 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 CXorf40BQ96DE9 158 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 TAAR9Q96RI9 348 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 GORASP1Q9BQQ3 440 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 ASB8Q9H765 288 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 LRRC40Q9H9A6 602 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 WASH6PQ9NQA3 447 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 SMOXQ9NWM0 555 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 KIF26BQ2KJY2 2108 aa12.18□□□□□ -0.46
SS18-225ENST00000585121 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 PRAMEF33A0A0G2JMD5 474 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 PRAMEF10O60809 474 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 POP7O75817 140 aaKnown RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 LIPCP11150 499 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 CCL4P13236 92 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 AMD1P17707 334 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ITGALP20701 1170 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 STIP1P31948 543 aaKnown RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 CSF2RBP32927 897 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ETV5P41161 510 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 CLN3Q13286 438 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 SPARCL1Q14515 664 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 RPS6KA1Q15418 735 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ABRAXAS1Q6UWZ7 409 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 CCDC81Q6ZN84 652 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 FAM129CQ86XR2 697 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ZNF547Q8IVP9 402 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ULK4Q96C45 1275 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 DCUN1D1Q96GG9 259 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 CCNL2Q96S94 520 aaPredicted RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 C19orf43Q9BQ61 176 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ASPSCR1Q9BZE9 553 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 ARNT2Q9HBZ2 717 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 CPNE5Q9HCH3 593 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 POT1Q9NUX5 634 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 SCHIP1Q9P0W5 487 aaPredicted RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 CRLS1Q9UJA2 301 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 COL27A1Q8IZC6 1860 aaPredicted RBP12.17□□□□□ -0.46
SS18-225ENST00000585121 IGSF10Q6WRI0 2623 aa12.17□□□□□ -0.46
SS18-225ENST00000585121 KLHL33A6NCF5 533 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 A8MU76 341 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SRP72O76094 671 aaKnown RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 UBXN7O94888 489 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 GAS8O95995 478 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 CCDC175P0C221 793 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SLC19A1P41440 591 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 RAB15P59190 212 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 RHDQ02161 417 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 CFHR1Q03591 330 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 OLIG2Q13516 323 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 PTPRCAPQ14761 206 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 TMEM26Q6ZUK4 368 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 BEND7Q8N7W2 519 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 RASGEF1AQ8N9B8 481 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SLC35B2Q8TB61 432 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 HEXDCQ8WVB3 486 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TMEM121Q9BTD3 319 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SLC39A1Q9NY26 324 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TMEM9Q9P0T7 183 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 PDP2Q9P2J9 529 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 FKBPLQ9UIM3 349 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 KCTD3Q9Y597 815 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 OR2AG2A6NM03 316 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 B4E171 279 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 C9orf172C9J069 976 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 STMND1H3BQB6 276 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 GAPDHSO14556 408 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 FGF3P11487 239 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 PBLDP30039 288 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 TSPAN7P41732 249 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms