RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OR4D9Q8NGE8 314 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 OR13C4Q8NGS5 318 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 CCDC97Q96F63 343 aaPredicted RBP20.1■□□□□ 0.81
SS18-224ENST00000584083 CCDC74BQ96LY2 380 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.1■□□□□ 0.81
SS18-224ENST00000584083 OR2AG2A6NM03 316 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 KLK10O43240 276 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 POP7O75817 140 aaKnown RBP20.09■□□□□ 0.81
SS18-224ENST00000584083 AP2A1O95782 977 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 VIPP01282 170 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 MPSTP25325 297 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 SLC5A2P31639 672 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 HADHAP40939 763 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 ZNF140P52738 457 aaPredicted RBP20.09■□□□□ 0.81
SS18-224ENST00000584083 CTSCP53634 463 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 MAPK10P53779 464 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 CFHR1Q03591 330 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 TLE3Q04726 772 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 SEPT6Q14141 434 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 OASLQ15646 514 aaKnown RBP20.09■□□□□ 0.81
SS18-224ENST00000584083 LONRF2Q1L5Z9 754 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 BROXQ5VW32 411 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 DET1Q7L5Y6 550 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 C11orf96Q7Z7L8 435 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 AMZ2Q86W34 360 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 TRIM58Q8NG06 486 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 RTP4Q96DX8 246 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 SCHIP1Q9P0W5 487 aaPredicted RBP20.09■□□□□ 0.81
SS18-224ENST00000584083 CRLS1Q9UJA2 301 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 PPP2R2CQ9Y2T4 447 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 ITPR1Q14643 2758 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 NBEAQ8NFP9 2946 aa20.09■□□□□ 0.81
SS18-224ENST00000584083 CCL22O00626 93 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 LDB2O43679 373 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 KCNJ13O60928 360 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 XRCC1P18887 633 aaPredicted RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 PBLDP30039 288 aaPredicted RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 ETV5P41161 510 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 LMAN1P49257 510 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 DRG2P55039 364 aaKnown RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 UBE2IP63279 158 aaKnown RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 TRA2AQ13595 282 aaKnown RBP eCLIP20.08■□□□□ 0.81
SS18-224ENST00000584083 POU6F1Q14863 301 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 FNBP1LQ5T0N5 605 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 TMEM71Q6P5X7 295 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 ABRAXAS1Q6UWZ7 409 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 LINC00523Q86TU6 105 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 NCSTNQ92542 709 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 DCUN1D1Q96GG9 259 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 TBC1D10AQ9BXI6 508 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 DPH1Q9BZG8 443 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 FAM96AQ9H5X1 160 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 WDR70Q9NW82 654 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 PIH1D1Q9NWS0 290 aaKnown RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 TMEM9Q9P0T7 183 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 ZNF624Q9P2J8 865 aaPredicted RBP20.08■□□□□ 0.81
SS18-224ENST00000584083 PCDHGA7Q9Y5G6 932 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 SLC30A1Q9Y6M5 507 aa20.08■□□□□ 0.81
SS18-224ENST00000584083 BPTFQ12830 3046 aa20.08■□□□□ 0.8
SS18-224ENST00000584083 ZFYVE26Q68DK2 2539 aa20.08■□□□□ 0.8
SS18-224ENST00000584083 PRR19A6NJB7 356 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 E7EVH7 732 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 HGSO14964 777 aaPredicted RBP20.07■□□□□ 0.8
SS18-224ENST00000584083 ITGALP20701 1170 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 CSTF2P33240 577 aaKnown RBP eCLIP20.07■□□□□ 0.8
SS18-224ENST00000584083 SLC19A1P41440 591 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 HALP42357 657 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 EPHA4P54764 986 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 XIAPP98170 497 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 SNAP47Q5SQN1 464 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 AGAP9Q5VTM2 703 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 WASH2PQ6VEQ5 465 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 CCDC89Q8N998 374 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 USP7Q93009 1102 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 ULK4Q96C45 1275 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 CXorf40BQ96DE9 158 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 SGF29Q96ES7 293 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 ZNF514Q96K75 400 aaPredicted RBP20.07■□□□□ 0.8
SS18-224ENST00000584083 DNAJC1Q96KC8 554 aaKnown RBP20.07■□□□□ 0.8
SS18-224ENST00000584083 C19orf43Q9BQ61 176 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 ETNK1Q9HBU6 452 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 WASH6PQ9NQA3 447 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 DNMT3AQ9Y6K1 912 aaPredicted RBP20.07■□□□□ 0.8
SS18-224ENST00000584083 PTPRQQ9UMZ3 2332 aa20.07■□□□□ 0.8
SS18-224ENST00000584083 OR52A4PA6NMU1 304 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 NVLO15381 856 aaKnown RBP20.06■□□□□ 0.8
SS18-224ENST00000584083 GAS8O95995 478 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 THRAP10827 490 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 RALBP11234 206 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 CCL4P13236 92 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 ETS1P14921 441 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 BRAFP15056 766 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 FDFT1P37268 417 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 WDR74Q6RFH5 385 aaPredicted RBP20.06■□□□□ 0.8
SS18-224ENST00000584083 TMEM26Q6ZUK4 368 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 DNAAF3Q8N9W5 541 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 AGBL5Q8NDL9 886 aa20.06■□□□□ 0.8
SS18-224ENST00000584083 TLR10Q9BXR5 811 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms