RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MAIP1Q8WWC4 291 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 LINC00615Q96LM1 132 aaPredicted RBP9.74□□□□□ -0.85
SKA2-208ENST00000583927 TTC25Q96NG3 672 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 DCBLD2Q96PD2 775 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 SLC38A3Q99624 504 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 NUDT22Q9BRQ3 303 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 SEMA6CQ9H3T2 930 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 PRORYQ9H606 182 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 SYNDIG1Q9H7V2 258 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 ARFGAP3Q9NP61 516 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 PRDM8Q9NQV8 689 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 POT1Q9NUX5 634 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 AKAP7Q9P0M2 348 aaPredicted RBP9.74□□□□□ -0.85
SKA2-208ENST00000583927 RIMKLBQ9ULI2 386 aa9.74□□□□□ -0.85
SKA2-208ENST00000583927 PCM1Q15154 2024 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 SNRNP200O75643 2136 aaKnown RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 IGLV3-16A0A075B6K0 115 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 TRBV5-4A0A0C4DH59 114 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A9O60656 530 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 MTX2O75431 263 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 SUN1O94901 812 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 JMJD7P0C870 316 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 BRAFP15056 766 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A6P19224 532 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 IDSP22304 550 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A1P22309 533 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A4P22310 534 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ITPKBP27987 946 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 CSF2RBP32927 897 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A3P35503 534 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 SLC19A1P41440 591 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 OLIG2Q13516 323 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 C16orf72Q14CZ0 275 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 SIX1Q15475 284 aaPredicted RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 LONRF2Q1L5Z9 754 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 AMZ1Q400G9 498 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 BCL7AQ4VC05 210 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ZNF648Q5T619 568 aaPredicted RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 BROXQ5VW32 411 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 METRNLQ641Q3 311 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 TMEM26Q6ZUK4 368 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ARHGAP22Q7Z5H3 698 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 SNX20Q7Z614 316 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 PDZD3Q86UT5 571 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 AMZ2Q86W34 360 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 TRAPPC5Q8IUR0 188 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 RASGEF1AQ8N9B8 481 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 GDAP1Q8TB36 358 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 STYXQ8WUJ0 223 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ZFPM2Q8WW38 1151 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 KCNE4Q8WWG9 221 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 PEX13Q92968 403 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ULK4Q96C45 1275 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 AHCYL2Q96HN2 611 aaKnown RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 TLR10Q9BXR5 811 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 RAB33BQ9H082 229 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 ASB8Q9H765 288 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A7Q9HAW7 530 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A10Q9HAW8 530 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 UGT1A8Q9HAW9 530 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 RDH14Q9HBH5 336 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 NLE1Q9NVX2 485 aaPredicted RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 DRG1Q9Y295 367 aaKnown RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 LOXL2Q9Y4K0 774 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 PCDHGA3Q9Y5H0 932 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 MN1Q10571 1320 aaPredicted RBP9.73□□□□□ -0.85
SKA2-208ENST00000583927 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 PIEZO2Q9H5I5 2752 aa9.73□□□□□ -0.85
SKA2-208ENST00000583927 C17orf113A0A1B0GUU1 675 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 PMS2P1A4D2B8 440 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 MROH6A6NGR9 719 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 B4E171 279 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 TOX3O15405 576 aaPredicted RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 BUD23O43709 281 aaKnown RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 SNX2O60749 519 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 C9P02748 559 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 GSTM1P09488 218 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 ANKRD34CP0C6C1 535 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 RALBP11234 206 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 HOXB3P14651 431 aaPredicted RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 MSH3P20585 1137 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 ITGALP20701 1170 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SLC5A2P31639 672 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CA5AP35218 305 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 TSPAN7P41732 249 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CTSCP53634 463 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 TMPRSS3P57727 454 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 GSTM4Q03013 218 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CDH17Q12864 832 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SEMA5AQ13591 1074 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 PTPRCAPQ14761 206 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 PHF19Q5T6S3 580 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 USP53Q70EK8 1073 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 NXPE1Q8N323 547 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 BEND7Q8N7W2 519 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms