RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRA2AQ13595 282 aaKnown RBP eCLIP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 C16orf72Q14CZ0 275 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 SEPT7Q16181 437 aaKnown RBP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 TMEM71Q6P5X7 295 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 RCBTB1Q8NDN9 531 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 RTP4Q96DX8 246 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 CCDC74BQ96LY2 380 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 ZMYND15Q9H091 742 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 ASB8Q9H765 288 aa19.19■□□□□ 0.66
SREBF1-220ENST00000581707 SCHIP1Q9P0W5 487 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-220ENST00000581707 HGSO14964 777 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 KLK10O43240 276 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 KCNJ13O60928 360 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 POP7O75817 140 aaKnown RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 MSH3P20585 1137 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 MPSTP25325 297 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 RPL10P27635 214 aaKnown RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 AKT1P31749 480 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 HADHAP40939 763 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 ZNF140P52738 457 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 CTSCP53634 463 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 UBE2IP63279 158 aaKnown RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 TMPRSS15P98073 1019 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 XIAPP98170 497 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 OASLQ15646 514 aaKnown RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 AGAP9Q5VTM2 703 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 BROXQ5VW32 411 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 TMEM220Q6QAJ8 160 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 ABRAXAS1Q6UWZ7 409 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 WASH2PQ6VEQ5 465 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 AMZ2Q86W34 360 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 TAB3Q8N5C8 712 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 OR13C4Q8NGS5 318 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 C1orf54Q8WWF1 131 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 C19orf43Q9BQ61 176 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 WASH6PQ9NQA3 447 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 TMEM9Q9P0T7 183 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 ZNF148Q9UQR1 794 aa19.18■□□□□ 0.66
SREBF1-220ENST00000581707 DNMT3AQ9Y6K1 912 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-220ENST00000581707 AHCTF1Q8WYP5 2266 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 OR2AG2A6NM03 316 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 NVLO15381 856 aaKnown RBP19.17■□□□□ 0.66
SREBF1-220ENST00000581707 LDB2O43679 373 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 AP2A1O95782 977 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 VIPP01282 170 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 THRAP10827 490 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 TPH1P17752 444 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 ETV5P41161 510 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 SLC19A1P41440 591 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 MAPK10P53779 464 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 EPHA4P54764 986 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 SNX1Q13596 522 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 LONRF2Q1L5Z9 754 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 WDR74Q6RFH5 385 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-220ENST00000581707 TRIM48Q8IWZ4 208 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 NCSTNQ92542 709 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 ZNF514Q96K75 400 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-220ENST00000581707 PRORYQ9H606 182 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 UCK1Q9HA47 277 aa19.17■□□□□ 0.66
SREBF1-220ENST00000581707 ZNF624Q9P2J8 865 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-220ENST00000581707 IFNB1P01574 187 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 BRAFP15056 766 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 MAPK9P45984 424 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 DRG2P55039 364 aaKnown RBP19.16■□□□□ 0.66
SREBF1-220ENST00000581707 DMPKQ09013 629 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 FNBP1LQ5T0N5 605 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 DET1Q7L5Y6 550 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 LINC00523Q86TU6 105 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 AGBL5Q8NDL9 886 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 TRIM58Q8NG06 486 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 USP7Q93009 1102 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 SGF29Q96ES7 293 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 TBC1D10AQ9BXI6 508 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 EPB41L1Q9H4G0 881 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 PDP2Q9P2J9 529 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 PPP2R2CQ9Y2T4 447 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 CACNA1GO43497 2377 aa19.16■□□□□ 0.66
SREBF1-220ENST00000581707 LILRA5A6NI73 299 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 OR52A4PA6NMU1 304 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 AGAP14A8MT82 685 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 CCL22O00626 93 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 CCL4P13236 92 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 ITGALP20701 1170 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 CSTF2P33240 577 aaKnown RBP eCLIP19.15■□□□□ 0.66
SREBF1-220ENST00000581707 UCNP55089 124 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 SEPT6Q14141 434 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 POU6F1Q14863 301 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 SNAP47Q5SQN1 464 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 TMEM26Q6ZUK4 368 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 ULK4Q96C45 1275 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 DCUN1D1Q96GG9 259 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 DNAJC1Q96KC8 554 aaKnown RBP19.15■□□□□ 0.66
SREBF1-220ENST00000581707 FAM96AQ9H5X1 160 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 ETNK1Q9HBU6 452 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 POT1Q9NUX5 634 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 PIH1D1Q9NWS0 290 aaKnown RBP19.15■□□□□ 0.66
SREBF1-220ENST00000581707 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.15■□□□□ 0.66
SREBF1-220ENST00000581707 CRLS1Q9UJA2 301 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 ACSL6Q9UKU0 697 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms