RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FAAP20Q6NZ36 180 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 MMS22LQ6ZRQ5 1243 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SEPT14Q6ZU15 432 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 ATG9AQ7Z3C6 839 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 CPLX4Q7Z7G2 160 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SDCCAG8Q86SQ7 713 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 FRMD1Q8N878 549 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 PCYOX1LQ8NBM8 494 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 NAXEQ8NCW5 288 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 HM13Q8TCT9 377 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 UTP15Q8TED0 518 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 DNAAF4Q8WXU2 420 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SENP5Q96HI0 755 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 RBM4BQ9BQ04 359 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SLC26A6Q9BXS9 759 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 MYH16Q9H6N6 1097 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 CWC15Q9P013 229 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 KLHL9Q9P2J3 617 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 LIMA1Q9UHB6 759 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 PGAP2Q9UHJ9 254 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 POLG2Q9UHN1 485 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 R3HDM2Q9Y2K5 976 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM98Q9Y2Y6 226 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 KCNE2Q9Y6J6 123 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 DISP3Q9P2K9 1392 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 ZNF318Q5VUA4 2279 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 A0A1W2PP11 408 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 PSMD14O00487 310 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 SORBS2O94875 1100 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ICAM1P05362 532 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 CLEC3BP05452 202 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 GATA1P15976 413 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ELF1P32519 619 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 AHRP35869 848 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ARCN1P48444 511 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 SPOCK1Q08629 439 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM187Q14656 261 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 MED22Q15528 200 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ZFP69Q49AA0 526 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ZC2HC1CQ53FD0 456 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ALFQ53S48 1182 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 TECRLQ5HYJ1 363 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 PLEKHM3Q6ZWE6 761 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ANKRD52Q8NB46 1076 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 RBM15BQ8NDT2 890 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 RFFLQ8WZ73 363 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 ZKSCAN4Q969J2 545 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 PHF21AQ96BD5 680 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 STAMBPL1Q96FJ0 436 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 NEUROD6Q96NK8 337 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 SIL1Q9H173 461 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 TCP11L1Q9NUJ3 509 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 CACNG5Q9UF02 275 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 RASAL2Q9UJF2 1139 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 C2CD2Q9Y426 696 aa3.07□□□□□ -1.92
SMCHD1-206ENST00000581631 CCDC189A1A4V9 331 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 H7C423 109 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 CIDEAO60543 219 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 CTSVO60911 334 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 NDUFS3O75489 264 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 TBX18O95935 607 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 NR2F2P24468 414 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 PIK3CAP42336 1068 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 TAS2R40P59535 323 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 MRPS34P82930 218 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 ZBED6P86452 979 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 NAB2Q15742 525 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 ARID4BQ4LE39 1312 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 JAKMIP3Q5VZ66 844 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 LCN10Q6JVE6 187 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 RBMS3Q6XE24 437 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 PIWIL4Q7Z3Z4 852 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 P2RY8Q86VZ1 359 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 RASGEF1CQ8N431 466 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 OR8K5Q8NH50 307 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 MOCOSQ96EN8 888 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 OXNAD1Q96HP4 312 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 EGLN2Q96KS0 407 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 PPM1MQ96MI6 270 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 SEMA3CQ99985 751 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 VGLL1Q99990 258 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 FGF22Q9HCT0 170 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 RRP7BPQ9NSQ0 103 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 IRAK4Q9NWZ3 460 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 BARHL2Q9NY43 387 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 FBXW11Q9UKB1 542 aa3.06□□□□□ -1.92
SMCHD1-206ENST00000581631 KANSL1LA0AUZ9 987 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PLEKHD1A6NEE1 506 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 C5orf60A6NFR6 353 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 HCRTR2O43614 444 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PLPP2O43688 288 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 WISP2O76076 250 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 KRT19P08727 400 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 HSPA1AP0DMV8 641 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 HSPA1BP0DMV9 641 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 CSF2RAP15509 400 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 DPEP1P16444 411 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 NFKBIAP25963 317 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 GALCP54803 685 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms