RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SIRPB2Q5JXA9 342 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 AGAP9Q5VTM2 703 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 CRTC3Q6UUV7 619 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 PID1Q7Z2X4 250 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 ZC3H18Q86VM9 953 aaKnown RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 SLC35F6Q8N357 371 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 OXNAD1Q96HP4 312 aaPredicted RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 ZPBPQ9BS86 351 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 OSGEPL1Q9H4B0 414 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 BPIFA1Q9NP55 256 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 FBXO8Q9NRD0 319 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 IL17CQ9P0M4 197 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 SCHIP1Q9P0W5 487 aaPredicted RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 EFR3BQ9Y2G0 817 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 FLNBO75369 2602 aaKnown RBP20.59■□□□□ 0.89
CCDC42-203ENST00000581598 ANKRD34CP0C6C1 535 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 WT1P19544 449 aaPredicted RBP20.59■□□□□ 0.89
CCDC42-203ENST00000581598 PPM1FP49593 454 aaPredicted RBP20.59■□□□□ 0.89
CCDC42-203ENST00000581598 ETF1P62495 437 aaKnown RBP20.59■□□□□ 0.89
CCDC42-203ENST00000581598 SLC1A5Q15758 541 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 ATP13A5Q4VNC0 1218 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 TMEM26Q6ZUK4 368 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 C11orf96Q7Z7L8 435 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 FAM129CQ86XR2 697 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 PLXDC1Q8IUK5 500 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 CCDC50Q8IVM0 306 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 KRT35Q92764 455 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 TBC1D10AQ9BXI6 508 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 SPRY4Q9C004 299 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 IL26Q9NPH9 171 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 POT1Q9NUX5 634 aa20.59■□□□□ 0.89
CCDC42-203ENST00000581598 ASH1LQ9NR48 2969 aaKnown RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF106Q9H2Y7 1883 aaKnown RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 B8ZZF3 427 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 PPFIA2O75334 1257 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 MTX2O75431 263 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 VIPP01282 170 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 C9P02748 559 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 CTNNA1P35221 906 aaKnown RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 SPAM1P38567 509 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 SLC19A1P41440 591 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 GNG11P61952 73 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 TMEM115Q12893 351 aaPredicted RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 NOMO1Q15155 1222 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 CEACAM20Q6UY09 585 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 RBM12BQ8IXT5 1001 aaKnown RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 RTP4Q96DX8 246 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF624Q9P2J8 865 aaPredicted RBP20.58■□□□□ 0.89
CCDC42-203ENST00000581598 PCDHA3Q9Y5H8 950 aa20.58■□□□□ 0.89
CCDC42-203ENST00000581598 PIEZO2Q9H5I5 2752 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 FTCDO95954 541 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 TUBB4AP04350 444 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 BRAFP15056 766 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 VCLP18206 1134 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 IDSP22304 550 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 PTPN7P35236 360 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 CHRNA4P43681 627 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 GTF2H3Q13889 308 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 PLA2G4EQ3MJ16 856 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 SNAP47Q5SQN1 464 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 MEI1Q5TIA1 1274 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 ANKS6Q68DC2 871 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 PEX26Q7Z412 305 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 GLT6D1Q7Z4J2 308 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 SLC25A41Q8N5S1 370 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 EXD3Q8N9H8 876 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 IPMKQ8NFU5 416 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 HAUS1Q96CS2 278 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 C16orf45Q96MC5 204 aaPredicted RBP20.57■□□□□ 0.88
CCDC42-203ENST00000581598 SLC12A9Q9BXP2 914 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 ZCCHC2Q9C0B9 1178 aaKnown RBP20.57■□□□□ 0.88
CCDC42-203ENST00000581598 OGFRQ9NZT2 677 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 RSPH14Q9UHP6 348 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 PILRAQ9UKJ1 303 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 AMFRQ9UKV5 643 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 DNAJC16Q9Y2G8 782 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 JRKLQ9Y4A0 524 aa20.57■□□□□ 0.88
CCDC42-203ENST00000581598 A8MU76 341 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 PDZK1P1A8MUH7 402 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 KIF2AO00139 706 aaPredicted RBP20.56■□□□□ 0.88
CCDC42-203ENST00000581598 FANCGO15287 622 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 TOX3O15405 576 aaPredicted RBP20.56■□□□□ 0.88
CCDC42-203ENST00000581598 RAD1O60671 282 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 CTNNA2P26232 953 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 MAPK9P45984 424 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 DMPKQ09013 629 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 ITGA9Q13797 1035 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 LDLRAP1Q5SW96 308 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 TRIM48Q8IWZ4 208 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 CACNA2D3Q8IZS8 1091 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 IL22RA1Q8N6P7 574 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 DDHD1Q8NEL9 900 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 GDAP1Q8TB36 358 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 EXTL1Q92935 676 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 FERMT1Q9BQL6 677 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 HEMGNQ9BXL5 484 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 GBA3Q9H227 469 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 SMOXQ9NWM0 555 aa20.56■□□□□ 0.88
CCDC42-203ENST00000581598 PKP3Q9Y446 797 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms