RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 LSMEM2Q8N112 164 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 TTC1Q99614 292 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.22■□□□□ 0.35
ATG13-228ENST00000581438 STRADBQ9C0K7 418 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 WASH6PQ9NQA3 447 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 KCNK4Q9NYG8 393 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 TCAF1Q9Y4C2 921 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 PCDHB1Q9Y5F3 818 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 ENTPD2Q9Y5L3 495 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 SAR1BQ9Y6B6 198 aa17.22■□□□□ 0.35
ATG13-228ENST00000581438 TRBV5-4A0A0C4DH59 114 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 ZNF185O15231 689 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 B4GAT1O43505 415 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 CPNE6O95741 557 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 EML2O95834 649 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 ATP1B2P14415 290 aaPredicted RBP17.21■□□□□ 0.35
ATG13-228ENST00000581438 ACRV1P26436 265 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 HALP42357 657 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 VPS41P49754 854 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 INHBCP55103 352 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 SESN2P58004 480 aaPredicted RBP17.21■□□□□ 0.35
ATG13-228ENST00000581438 OR1D5P58170 312 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 GPLD1P80108 840 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 CYP4F3Q08477 520 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 AMZ1Q400G9 498 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 MAP9Q49MG5 647 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.21■□□□□ 0.35
ATG13-228ENST00000581438 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
ATG13-228ENST00000581438 LRRC8BQ6P9F7 803 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 ABRAXAS1Q6UWZ7 409 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 DET1Q7L5Y6 550 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 PIM3Q86V86 326 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 SERPINA9Q86WD7 417 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 TRIM48Q8IWZ4 208 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 MDM1Q8TC05 714 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 SGF29Q96ES7 293 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 AHCYL2Q96HN2 611 aaKnown RBP17.21■□□□□ 0.35
ATG13-228ENST00000581438 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 IL22Q9GZX6 179 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 VPS37BQ9H9H4 285 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 CPNE7Q9UBL6 633 aa17.21■□□□□ 0.35
ATG13-228ENST00000581438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATG13-228ENST00000581438 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 MGAT4DA6NG13 374 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 PRR19A6NJB7 356 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 VIPP01282 170 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 XRCC1P18887 633 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 CCKBRP32239 447 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 PPARGP37231 505 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 LSSP48449 732 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 PPM1FP49593 454 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 PRAMEP78395 509 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 EIF3IQ13347 325 aaKnown RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 AFTPHQ6ULP2 937 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 BEND7Q8N7W2 519 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 OR10G6Q8NH81 332 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 ATXN7L3BQ96GX2 97 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 LINC00615Q96LM1 132 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 POLR1BQ9H9Y6 1135 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
ATG13-228ENST00000581438 ATXN7L1Q9ULK2 861 aaPredicted RBP17.2■□□□□ 0.34
ATG13-228ENST00000581438 UNC13CQ8NB66 2214 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 IGLV3-16A0A075B6K0 115 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 IGHV1OR21-1A0A087WYE8 117 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 CCDC187A0A096LP49 1063 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 CCDC162PA2VCL2 907 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 F8W8V4 182 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 QSOX1O00391 747 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 CAPNS1P04632 268 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 RPL10P27635 214 aaKnown RBP17.19■□□□□ 0.34
ATG13-228ENST00000581438 PBLDP30039 288 aaPredicted RBP17.19■□□□□ 0.34
ATG13-228ENST00000581438 PAFAH1B1P43034 410 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 MAGEA6P43360 314 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 ARSDP51689 593 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 EPHA4P54764 986 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 GABREP78334 506 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 ACVR1Q04771 509 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 SQSTM1Q13501 440 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 ITIH4Q14624 930 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 PPP1R7Q15435 360 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 ARMC3Q5W041 872 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 PROSER1Q86XN7 944 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 RBM12BQ8IXT5 1001 aaKnown RBP17.19■□□□□ 0.34
ATG13-228ENST00000581438 OR13J1Q8NGT2 312 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 OR6P1Q8NGX9 317 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 OR2L2Q8NH16 312 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 WDR36Q8NI36 951 aaKnown RBP17.19■□□□□ 0.34
ATG13-228ENST00000581438 HDAC10Q969S8 669 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 TMEM159Q96B96 161 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 CXorf40BQ96DE9 158 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
ATG13-228ENST00000581438 RUNDC3BQ96NL0 473 aa17.19■□□□□ 0.34
ATG13-228ENST00000581438 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms