RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AFPP02771 609 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 TPOP07202 933 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 MT3P25713 68 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 GAS1P54826 345 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 CD81P60033 236 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 UBXN2AP68543 259 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 COG7P83436 770 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 AIMP1Q12904 312 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SF3B4Q15427 424 aaKnown RBP eCLIP4.58□□□□□ -1.684e-7■■■■■ 49.6
SMCHD1-205ENST00000581383 CCDC96Q2M329 555 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 FAM98BQ52LJ0 330 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 ADALQ6DHV7 355 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 RPUSD3Q6P087 351 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 TPRG1Q6ZUI0 275 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 USP43Q70EL4 1123 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 ATG9AQ7Z3C6 839 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 MAP7D3Q8IWC1 876 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 ODF3L1Q8IXM7 274 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC5A8Q8N695 610 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 POMGNT2Q8NAT1 580 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC38A9Q8NBW4 561 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SPATA22Q8NHS9 363 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC38A5Q8WUX1 472 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 DNAAF4Q8WXU2 420 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 ABTB1Q969K4 478 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF622Q969S3 477 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 PTERQ96BW5 349 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 DACH2Q96NX9 599 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SPATC1LQ9H0A9 340 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 IL25Q9H293 177 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 PPIL3Q9H2H8 161 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 CHMP1AQ9HD42 196 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 TRMT1Q9NXH9 659 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SMARCAL1Q9NZC9 954 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 MARCH4Q9P2E8 410 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 LARSQ9P2J5 1176 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 SIX4Q9UIU6 781 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 TRIP12Q14669 1992 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 PTPRCP08575 1304 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 GPR75-ASB3A0A0A6YYF3 556 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 SRRM3A6NNA2 597 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 CSPG5O95196 566 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 PMS2P2O95744 297 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 LINC00271P0C7V0 271 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 FCGR1AP12314 374 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 MATR3P43243 847 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 ARSEP51690 589 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 ISL1P61371 349 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 TUBA1BP68363 451 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC20A2Q08357 652 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 DLG1Q12959 904 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 MVPQ14764 893 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 ZDHHC20Q5W0Z9 365 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 FAM122CQ6P4D5 195 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 DENND5BQ6ZUT9 1274 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 INTS8Q75QN2 995 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 LDB1Q86U70 411 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 TICAM2Q86XR7 235 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 PM20D2Q8IYS1 436 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 RNF113BQ8IZP6 322 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 GUF1Q8N442 669 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 POGLUT1Q8NBL1 392 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC20A1Q8WUM9 679 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 PIGTQ969N2 578 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM19Q96HH6 336 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 CCDC106Q9BWC9 280 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 MRPL1Q9BYD6 325 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 MMP27Q9H306 513 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 KCNK15Q9H427 330 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 MALT1Q9UDY8 824 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 AMDHD2Q9Y303 409 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM184BQ9Y519 407 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 PCDHGB1Q9Y5G3 927 aa4.57□□□□□ -1.68
SMCHD1-205ENST00000581383 H0YIN7 160 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 CLGNO14967 610 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC16A5O15375 505 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 NDUFS4O43181 175 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 KRT86O43790 486 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 PSMD10O75832 226 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 IGKV3-20P01619 116 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 ABCB1P08183 1280 aaPredicted RBP4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 MYOD1P15172 320 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 KCNA5P22460 613 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 CAPZA2P47755 286 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 DSCR9P59020 149 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 KRT81Q14533 505 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 ALS2CLQ60I27 953 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 RAD9BQ6WBX8 426 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 CREB3L2Q70SY1 520 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF534Q76KX8 674 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 HAUS6Q7Z4H7 955 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 SATL1Q86VE3 508 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 GALNT13Q8IUC8 556 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 C1orf87Q8N0U7 546 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 THAP6Q8TBB0 222 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 TBC1D16Q8TBP0 767 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms