RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SLC12A2P55011 1212 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 FZD2Q14332 565 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SEMA3AQ14563 771 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 TRIM61Q5EBN2 209 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 BEND6Q5SZJ8 279 aaPredicted RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 RD3Q7Z3Z2 195 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 AMZ2Q86W34 360 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 HID1Q8IV36 788 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SLC22A18ASQ8N1D0 253 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 BEND7Q8N7W2 519 aaPredicted RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 RASGEF1AQ8N9B8 481 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SUMF1Q8NBK3 374 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 UHMK1Q8TAS1 419 aaKnown RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 SLC44A1Q8WWI5 657 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SGF29Q96ES7 293 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 LINC00615Q96LM1 132 aaPredicted RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 CCM2Q9BSQ5 444 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 CARS2Q9HA77 564 aaKnown RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 NCDNQ9UBB6 729 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SPASTQ9UBP0 616 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 ZNF180Q9UJW8 692 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 SUFUQ9UMX1 484 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 GPSM3Q9Y4H4 160 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 ATXN2Q99700 1313 aaKnown RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 RALGAPA1Q6GYQ0 2036 aa14.08□□□□□ -0.15
SKA2-205ENST00000580541 CACNA1EQ15878 2313 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 NEMP2A6NFY4 417 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 CXorf49A8MYA2 514 aaPredicted RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 ARHGAP33O14559 1287 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 OR1I1O60431 355 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 DNAJC6O75061 913 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 VPS26AO75436 327 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 TCEA3O75764 348 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 KRT37O76014 449 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 JUNDP17535 347 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 CHRM3P20309 590 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 CTSKP43235 329 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 GNPDA1P46926 289 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 PRLHRP49683 370 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 ILF3Q12906 894 aaKnown RBP eCLIP14.08□□□□□ -0.162e-15■■■■□ 22.5
SKA2-205ENST00000580541 ELOCQ15369 112 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 SMAD1Q15797 465 aaKnown RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 UAP1Q16222 522 aaPredicted RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 KIF19Q2TAC6 998 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 PYCR3Q53H96 274 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 FAM45BPQ6NSW5 357 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 DET1Q7L5Y6 550 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 ZC3HC1Q86WB0 502 aaKnown RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 FSTL5Q8N475 847 aaPredicted RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 TSACCQ96A04 125 aaPredicted RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 MTBPQ96DY7 904 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 OR2M4Q96R27 311 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 RBBP8Q99708 897 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 TIMM29Q9BSF4 260 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 BOCQ9BWV1 1114 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 P2RY12Q9H244 342 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 SPATS2LQ9NUQ6 558 aaKnown RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 TAS2R13Q9NYV9 303 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 KLHL42Q9P2K6 505 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 VWA7Q9Y334 891 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
SKA2-205ENST00000580541 PIKFYVEQ9Y2I7 2098 aa14.08□□□□□ -0.16
SKA2-205ENST00000580541 PLXNB3Q9ULL4 1909 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 IQANK1A0A1B0GTG1 560 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 MGAT4DA6NG13 374 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 OR2AG2A6NM03 316 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 POP7O75817 140 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 TRIM16O95361 564 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 APOA4P06727 396 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ZNF806P0C7X5 589 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 NME1P15531 152 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 CD9P21926 228 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 RXRGP48443 463 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 MPP1Q00013 466 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 B4GALNT1Q00973 533 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 POU4F1Q01851 419 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 EIF2B5Q13144 721 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 RASA2Q15283 850 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 TMED2Q15363 201 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 INSCQ1MX18 579 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ALG11Q2TAA5 492 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 TTLL9Q3SXZ7 439 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 PLA2G2CQ5R387 149 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ZNF648Q5T619 568 aaPredicted RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 CNSTQ6PJW8 725 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 OTOAQ7RTW8 1153 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 HDXQ7Z353 690 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 SPATS2Q86XZ4 545 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 PHACTR4Q8IZ21 702 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 RIBC1Q8N443 379 aaPredicted RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 CLDN19Q8N6F1 224 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms