RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PPARGP37231 505 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 MAPK10P53779 464 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PRAMEP78395 509 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 B4GALNT1Q00973 533 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CACNG1Q06432 222 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC173Q0VFZ6 552 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 GPS1Q13098 491 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 RTP5Q14D33 572 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PPP1R7Q15435 360 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 KHDC1Q4VXA5 237 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM164Q5U3C3 297 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 KCTD11Q693B1 232 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CASC4Q6P4E1 433 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DRICH1Q6PGQ1 229 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 C19orf48Q6RUI8 117 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 NLRP9Q7RTR0 991 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SNX20Q7Z614 316 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 B3GNT8Q7Z7M8 397 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 REXO1L1PQ8IX06 675 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CFAP206Q8IYR0 622 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 NXPE1Q8N323 547 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SLC35F6Q8N357 371 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SFRP1Q8N474 314 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 OTUD6BQ8N6M0 293 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DDHD1Q8NEL9 900 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PPHLN1Q8NEY8 458 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 STYXQ8WUJ0 223 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 HDAC10Q969S8 669 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 RTP4Q96DX8 246 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 NAF1Q96HR8 494 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DNAJC1Q96KC8 554 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF578Q96N58 590 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DPYSL5Q9BPU6 564 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 TIMM29Q9BSF4 260 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM121BQ9BXQ6 578 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 VPS37BQ9H9H4 285 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SARS2Q9NP81 518 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 NLE1Q9NVX2 485 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 BFARQ9NZS9 450 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PISDQ9UG56 409 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 TMPRSS11EQ9UL52 423 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PSMD13Q9UNM6 376 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PCYT1BQ9Y5K3 369 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 ENTPD2Q9Y5L3 495 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DNMT3AQ9Y6K1 912 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SPEGQ15772 3267 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 ARID1BQ8NFD5 2236 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SHROOM3Q8TF72 1996 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 IGHV1OR21-1A0A087WYE8 117 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CTAGE9A4FU28 777 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 KLHL33A6NCF5 533 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 MGAT4DA6NG13 374 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 OR52A4PA6NMU1 304 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 A8MU76 341 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 F8W8V4 182 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 NTN3O00634 580 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CASC3O15234 703 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SUN1O94901 812 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 HGFP14210 728 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ATP1B2P14415 290 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 TYRP1P17643 537 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 XRCC1P18887 633 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 GRIA1P42261 906 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 FASLGP48023 281 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 NPY2RP49146 381 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CLCNKAP51800 687 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF140P52738 457 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CTSCP53634 463 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ERVPABLB-1P60509 514 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 GPLD1P80108 840 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 EIF3IQ13347 325 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SEMA5AQ13591 1074 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PLCL1Q15111 1095 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CLPPQ16740 277 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 FASTKD1Q53R41 847 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PCID2Q5JVF3 399 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 BROXQ5VW32 411 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 LYPLAL1Q5VWZ2 237 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ARMC6Q6NXE6 501 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 KLHL35Q6PF15 583 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC137Q6PK04 289 aaKnown RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF438Q7Z4V0 828 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SERPINA9Q86WD7 417 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 C17orf82Q86X59 251 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 FAM129CQ86XR2 697 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PLXDC1Q8IUK5 500 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF547Q8IVP9 402 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PRELID2Q8N945 189 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 GSDMBQ8TAX9 411 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 NAT14Q8WUY8 206 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM159Q96B96 161 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC97Q96F63 343 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 PRR11Q96HE9 360 aaPredicted RBP6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CDKN2AIPNLQ96HQ2 116 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 CAPZA3Q96KX2 299 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 SLC46A1Q96NT5 459 aa6.44□□□□□ -1.38
TRAF4-213ENST00000578917 OSBPL9Q96SU4 736 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms