RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 SQSTM1Q13501 440 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 IGF2-ASQ6U949 168 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 PPP1R21Q6ZMI0 780 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 ZNF574Q6ZN55 896 aaPredicted RBP25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 MICALCLQ6ZW33 695 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 DET1Q7L5Y6 550 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 RAB11FIP2Q7L804 512 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 GSTA5Q7RTV2 222 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 SNX20Q7Z614 316 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 AMZ2Q86W34 360 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 FBXO39Q8N4B4 442 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 PRELID2Q8N945 189 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 STYXQ8WUJ0 223 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 SH3KBP1Q96B97 665 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 ULK4Q96C45 1275 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 SGF29Q96ES7 293 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 PDLIM2Q96JY6 352 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 DCBLD2Q96PD2 775 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 HOMER3Q9NSC5 361 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 TRMT1Q9NXH9 659 aaKnown RBP25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 DNMT3AQ9Y6K1 912 aaPredicted RBP25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 SLC30A1Q9Y6M5 507 aa25.96■■□□□ 1.75
PPP4R1-204ENST00000577393 MROH6A6NGR9 719 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 KCNJ13O60928 360 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 RPL10P27635 214 aaKnown RBP25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 EIF2S3P41091 472 aaKnown RBP25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 ERVPABLB-1P60509 514 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 UBE2IP63279 158 aaKnown RBP25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 GPLD1P80108 840 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 CFHR1Q03591 330 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 EIF3IQ13347 325 aaKnown RBP25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 FNBP1LQ5T0N5 605 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 PHF19Q5T6S3 580 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 ABRAXAS1Q6UWZ7 409 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 WASH2PQ6VEQ5 465 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 SLC35F6Q8N357 371 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 RASGEF1CQ8N431 466 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 AVL9Q8NBF6 648 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 NAT14Q8WUY8 206 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 CDKN2AIPNLQ96HQ2 116 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 ZNF514Q96K75 400 aaPredicted RBP25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 PBKQ96KB5 322 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 WASH6PQ9NQA3 447 aa25.95■■□□□ 1.74
PPP4R1-204ENST00000577393 A0A087WV48 116 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 CCDC78A2IDD5 438 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 H7C0S8 307 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 AGRPO00253 132 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 PLD2O14939 933 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 TNFSF15O95150 251 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 APRTP07741 180 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 HOXB3P14651 431 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 BRAFP15056 766 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 XRCC1P18887 633 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 SLC19A1P41440 591 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 DRG2P55039 364 aaKnown RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 CCDC38Q502W7 563 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 AGAP9Q5VTM2 703 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 NXPE1Q8N323 547 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 BEND7Q8N7W2 519 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 OR10G6Q8NH81 332 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 CCDC97Q96F63 343 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 DCUN1D1Q96GG9 259 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 AHCYL2Q96HN2 611 aaKnown RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 MS4A14Q96JA4 679 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 CASS4Q9NQ75 786 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 THSD1Q9NS62 852 aa25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 ZNF624Q9P2J8 865 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-204ENST00000577393 DSPP15924 2871 aaKnown RBP25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 GAS8O95995 478 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 HGFP14210 728 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 PSMA3P25788 255 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 PBLDP30039 288 aaPredicted RBP25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 CSF2RBP32927 897 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 CDKN1CP49918 316 aaPredicted RBP25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 DMPKQ09013 629 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 GPR33Q49SQ1 333 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 ZRANB3Q5FWF4 1079 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 C4orf22Q6V702 233 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 HNRNPLLQ8WVV9 542 aaKnown RBP25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 WDR37Q9Y2I8 494 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 LOXL2Q9Y4K0 774 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 LAMA5O15230 3695 aa25.93■■□□□ 1.74
PPP4R1-204ENST00000577393 CFAP47Q6ZTR5 3102 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 IGHV5-10-1A0A0J9YXX1 117 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 VIPP01282 170 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 PPM1FP49593 454 aaPredicted RBP25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 LIMK2P53671 638 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 SKIDA1Q1XH10 827 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 C19orf48Q6RUI8 117 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 FAM83HQ6ZRV2 1179 aaPredicted RBP25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 TRIM48Q8IWZ4 208 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 OR4D9Q8NGE8 314 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 COPS8Q99627 209 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 DPYSL5Q9BPU6 564 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 TMEM9Q9P0T7 183 aa25.92■■□□□ 1.74
PPP4R1-204ENST00000577393 TRBV5-4A0A0C4DH59 114 aa25.91■■□□□ 1.74
PPP4R1-204ENST00000577393 OR52A4PA6NMU1 304 aa25.91■■□□□ 1.74
PPP4R1-204ENST00000577393 CDRT15L2A8MXV6 281 aa25.91■■□□□ 1.74
PPP4R1-204ENST00000577393 SGTAO43765 313 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms