RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TTC9Q92623 222 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 APMAPQ9HDC9 416 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 RAD18Q9NS91 495 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 PIH1D1Q9NWS0 290 aaKnown RBP11.7□□□□□ -0.54
LITAF-219ENST00000576334 FAM8A1Q9UBU6 413 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 ACSL6Q9UKU0 697 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
LITAF-219ENST00000576334 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 HGSO14964 777 aaPredicted RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 DUX1O43812 170 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 KIF1CO43896 1103 aaKnown RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 VEGFDO43915 354 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 METTL18O95568 372 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 PRSS56P0CW18 603 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 CSTF2P33240 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
LITAF-219ENST00000576334 PTPN7P35236 360 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 LEPRP48357 1165 aaKnown RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 CLCNKAP51800 687 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 UCNP55089 124 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 PPP1CAP62136 330 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 PEX6Q13608 980 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 NFE2L1Q14494 772 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 TMEM220Q6QAJ8 160 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 XKR5Q6UX68 686 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 DTX1Q86Y01 620 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 CDKL3Q8IVW4 592 aaPredicted RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 FAM71DQ8N9W8 422 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 AGBL5Q8NDL9 886 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 GPR150Q8NGU9 434 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 RSC1A1Q92681 617 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 TMEM159Q96B96 161 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 TAAR9Q96RI9 348 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 TRABDQ9H4I3 376 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 AMFRQ9UKV5 643 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 EFR3BQ9Y2G0 817 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 PKP3Q9Y446 797 aa11.69□□□□□ -0.54
LITAF-219ENST00000576334 CFAP20Q9Y6A4 193 aaKnown RBP11.69□□□□□ -0.54
LITAF-219ENST00000576334 KIR2DS5A0A0G2JLQ3 304 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 A0A0G2JNG1 304 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 KIR2DS3K7RE56 304 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 STX7O15400 261 aaKnown RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 POP7O75817 140 aaKnown RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 PRAMEF1O95521 474 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 VIPP01282 170 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 TPH1P17752 444 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 XRCC1P18887 633 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 TNNT3P45378 269 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 SEPHS1P49903 392 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 CDKN1CP49918 316 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 XIAPP98170 497 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 TRA2AQ13595 282 aaKnown RBP eCLIP11.68□□□□□ -0.54
LITAF-219ENST00000576334 GPR18Q14330 331 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 KIR2DS5Q14953 304 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 MANEAQ5SRI9 462 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 FNBP1LQ5T0N5 605 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 ITPRIPL1Q6GPH6 555 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 DUS1LQ6P1R4 473 aaKnown RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 WDR74Q6RFH5 385 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 TMEM26Q6ZUK4 368 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 ARHGAP22Q7Z5H3 698 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 PRUNE1Q86TP1 453 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 ZNF843Q8N446 348 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 LILRA3Q8N6C8 439 aaPredicted RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 DDHD1Q8NEL9 900 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 ZNF398Q8TD17 642 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 SNRNP27Q8WVK2 155 aaKnown RBP11.68□□□□□ -0.54
LITAF-219ENST00000576334 ATG4AQ8WYN0 398 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 SPATA13Q96N96 652 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 TGM7Q96PF1 710 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 NRTNQ99748 197 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 TBL1YQ9BQ87 522 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 TIMM29Q9BSF4 260 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 HACD3Q9P035 362 aa11.68□□□□□ -0.54
LITAF-219ENST00000576334 CCDC78A2IDD5 438 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 GPR89AB7ZAQ6 455 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 ZW10O43264 779 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SGTAO43765 313 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 ANXA9O76027 345 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 UBXN7O94888 489 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 TJP3O95049 919 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 GPR89BP0CG08 455 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 LPOP22079 712 aaPredicted RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 IDSP22304 550 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 AKT1P31749 480 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 SH3BP2P78314 561 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 KIF5AQ12840 1032 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
LITAF-219ENST00000576334 TAF1AQ15573 450 aaPredicted RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 CLPPQ16740 277 aaPredicted RBP11.67□□□□□ -0.54
LITAF-219ENST00000576334 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms