RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PMLP29590 882 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ARRB1P49407 418 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 TTPAP49638 278 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CCT8P50990 548 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 BLKP51451 505 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 HNRNPKP61978 463 aaKnown RBP eCLIP8.45□□□□□ -1.06
NUP88-211ENST00000575976 MGAT5Q09328 741 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CTBP1Q13363 440 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 FRG1Q14331 258 aaKnown RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 TCEA2Q15560 299 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 KYNUQ16719 465 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 TYSND1Q2T9J0 566 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 AASDHQ4L235 1098 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 PRRT3Q5FWE3 981 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ZNF789Q5FWF6 425 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 AARS2Q5JTZ9 985 aaKnown RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 TEDDM1Q5T9Z0 273 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ZNF470Q6ECI4 717 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 MRNIPQ6NTE8 343 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 TMEM220Q6QAJ8 160 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CRTC3Q6UUV7 619 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CHST15Q7LFX5 561 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 SDCCAG8Q86SQ7 713 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 GATAD2AQ86YP4 633 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 GALNT13Q8IUC8 556 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CILP2Q8IUL8 1156 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 RELL1Q8IUW5 271 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ZNF547Q8IVP9 402 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CLDN19Q8N6F1 224 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CCL4L1Q8NHW4 92 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CALML6Q8TD86 181 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 LMX1AQ8TE12 382 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 HEXDCQ8WVB3 486 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 OR2M4Q96R27 311 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 FAM167BQ9BTA0 163 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 LRRC61Q9BV99 259 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 SLC13A1Q9BZW2 595 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ZCCHC2Q9C0B9 1178 aaKnown RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 CLPBQ9H078 707 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 TSPYL1Q9H0U9 437 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 TMEM168Q9H0V1 697 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CDC42EP4Q9H3Q1 356 aaKnown RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 PPANQ9NQ55 473 aaKnown RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 FBXO6Q9NRD1 293 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 SMYD2Q9NRG4 433 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 TM7SF3Q9NS93 570 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 UCKL1Q9NWZ5 548 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 MOCS1Q9NZB8 636 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 SLC17A6Q9P2U8 582 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 FBXO5Q9UKT4 447 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 PLEKHM1Q9Y4G2 1056 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ADAMTS9Q9P2N4 1935 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 TCRBV9S1A1TA0A576 114 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 UBA6A0AVT1 1052 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 HAX1O00165 279 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 KMOO15229 486 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 POP7O75817 140 aaKnown RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 PIAS1O75925 651 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 HAUS5O94927 633 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 S1PR4O95977 384 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 C1QAP02745 245 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 ACP5P13686 325 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 ZNF7P17097 686 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 DGKAP23743 735 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 AK4P27144 223 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 EPHA8P29322 1005 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 PPARGP37231 505 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 NSG1P42857 185 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 SLC1A2P43004 574 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 MPP1Q00013 466 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 SLMAPQ14BN4 828 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 BCL7AQ4VC05 210 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 WDR93Q6P2C0 686 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 PACS1Q6VY07 963 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 CYS1Q717R9 158 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 KANSL1Q7Z3B3 1105 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 C11orf96Q7Z7L8 435 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 LRRTM4Q86VH4 590 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 NRROSQ86YC3 692 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 TRAPPC5Q8IUR0 188 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 CNTN4Q8IWV2 1026 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 SLC25A45Q8N413 288 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 PIP4P2Q8N4L2 257 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 C2CD4AQ8NCU7 369 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 ZNF548Q8NEK5 533 aaPredicted RBP8.44□□□□□ -1.06
NUP88-211ENST00000575976 SAP25Q8TEE9 199 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 LPGAT1Q92604 370 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 TCF12Q99081 682 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 PARD6BQ9BYG5 372 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 TXLNGYQ9BZA5 131 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 P2RY12Q9H244 342 aa8.44□□□□□ -1.06
NUP88-211ENST00000575976 VPS37BQ9H9H4 285 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms