RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 UNC5BQ8IZJ1 945 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 CLDN19Q8N6F1 224 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
PFN1-203ENST00000574872 FBXO36Q8NEA4 188 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 CNDP2Q96KP4 475 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 RHOXF2Q9BQY4 288 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 DUSP23Q9BVJ7 150 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 OSGEPL1Q9H4B0 414 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 SLC32A1Q9H598 525 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 SAYSD1Q9NPB0 183 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 KLC4Q9NSK0 619 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 C20orf96Q9NUD7 363 aaPredicted RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 SPATS2LQ9NUQ6 558 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 TAAR2Q9P1P5 351 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 GULP1Q9UBP9 304 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 ZC3H7BQ9UGR2 993 aaKnown RBP16.03■□□□□ 0.16
PFN1-203ENST00000574872 TEX264Q9Y6I9 313 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 PRSS21Q9Y6M0 314 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
PFN1-203ENST00000574872 IGLV3-16A0A075B6K0 115 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 E7ESA3 106 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 TPP1O14773 563 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 KMOO15229 486 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SGTAO43765 313 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SNX2O60749 519 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 POP7O75817 140 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 LDOC1O95751 146 aaPredicted RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 ATP1B2P14415 290 aaPredicted RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 ZNF7P17097 686 aaPredicted RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 CSRP1P21291 193 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 PMLP29590 882 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 DRG2P55039 364 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 CAV1Q03135 178 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 DNAJC3Q13217 504 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 THOC5Q13769 683 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 ITIH4Q14624 930 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 LONRF1Q17RB8 773 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 LYPLAL1Q5VWZ2 237 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 NEPROQ6NW34 567 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 UNC5AQ6ZN44 842 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 C11orf96Q7Z7L8 435 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 KYQ8NBH2 561 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 BAHD1Q8TBE0 780 aaPredicted RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 HEXDCQ8WVB3 486 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SCG3Q8WXD2 468 aaKnown RBP16.02■□□□□ 0.16
PFN1-203ENST00000574872 IFT81Q8WYA0 676 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SEC14L1Q92503 715 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 APOLD1Q96LR9 279 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 TTC1Q99614 292 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 DPEP2Q9H4A9 486 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 PLAC1Q9HBJ0 212 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 DLL3Q9NYJ7 618 aa16.02■□□□□ 0.16
PFN1-203ENST00000574872 SPAARA0A1B0GVQ0 90 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 TTC4O95801 387 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 NSG1P42857 185 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 DAB2P98082 770 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 TRIP6Q15654 476 aaKnown RBP16.01■□□□□ 0.15
PFN1-203ENST00000574872 SEPT7Q16181 437 aaKnown RBP16.01■□□□□ 0.15
PFN1-203ENST00000574872 PROX2Q3B8N5 592 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 CCDC157Q569K6 752 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 SPANXN3Q5MJ09 141 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 ZNF470Q6ECI4 717 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 MRNIPQ6NTE8 343 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 ZCCHC8Q6NZY4 707 aaKnown RBP16.01■□□□□ 0.15
PFN1-203ENST00000574872 LVRNQ6Q4G3 990 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 CERS6Q6ZMG9 384 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 CAPN12Q6ZSI9 719 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 SLC35F3Q8IY50 421 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 SDR16C5Q8N3Y7 309 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 PATE1Q8WXA2 126 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 LRRC39Q96DD0 335 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 ZNF514Q96K75 400 aaPredicted RBP16.01■□□□□ 0.15
PFN1-203ENST00000574872 TIMM29Q9BSF4 260 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 NAT9Q9BTE0 207 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 FAM114A2Q9NRY5 505 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 FAM169AQ9Y6X4 670 aa16.01■□□□□ 0.15
PFN1-203ENST00000574872 LY6G6EA0A0G2JKS1 128 aa16■□□□□ 0.15
PFN1-203ENST00000574872 BHMG1C9JSJ3 638 aaPredicted RBP16■□□□□ 0.15
PFN1-203ENST00000574872 NDUFS3O75489 264 aa16■□□□□ 0.15
PFN1-203ENST00000574872 KCNK5O95279 499 aa16■□□□□ 0.15
PFN1-203ENST00000574872 EML2O95834 649 aa16■□□□□ 0.15
PFN1-203ENST00000574872 ERVK-10P10266 1014 aa16■□□□□ 0.15
PFN1-203ENST00000574872 PPARGP37231 505 aaPredicted RBP16■□□□□ 0.15
PFN1-203ENST00000574872 ID4P47928 161 aa16■□□□□ 0.15
PFN1-203ENST00000574872 TTPAP49638 278 aa16■□□□□ 0.15
PFN1-203ENST00000574872 PRLHRP49683 370 aa16■□□□□ 0.15
PFN1-203ENST00000574872 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
PFN1-203ENST00000574872 BCL7AQ4VC05 210 aa16■□□□□ 0.15
PFN1-203ENST00000574872 HSP90AA5PQ58FG0 334 aa16■□□□□ 0.15
PFN1-203ENST00000574872 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
PFN1-203ENST00000574872 PACS1Q6VY07 963 aa16■□□□□ 0.15
PFN1-203ENST00000574872 FAM83HQ6ZRV2 1179 aaPredicted RBP16■□□□□ 0.15
PFN1-203ENST00000574872 SDCCAG8Q86SQ7 713 aaPredicted RBP16■□□□□ 0.15
PFN1-203ENST00000574872 AMZ2Q86W34 360 aa16■□□□□ 0.15
PFN1-203ENST00000574872 KCNMB4Q86W47 210 aa16■□□□□ 0.15
PFN1-203ENST00000574872 DENND6AQ8IWF6 608 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms