RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
RAB40B-206ENST00000571995 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 MTERF1Q99551 399 aaKnown RBP16.04■□□□□ 0.16
RAB40B-206ENST00000571995 GLYATL1P3A0A0U1RQE8 302 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 IL1BP01584 269 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 GBAP04062 536 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 FASP25445 335 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 LEPRP48357 1165 aaKnown RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 RD3Q7Z3Z2 195 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 EXD2Q9NVH0 621 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 WDR70Q9NW82 654 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 PRPF19Q9UMS4 504 aaKnown RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 RPL26L1Q9UNX3 145 aaKnown RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 WDR87Q6ZQQ6 2873 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 CLOCKO15516 846 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 SLC22A3O75751 556 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 ZBTB11O95625 1053 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 CTSOP43234 321 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 VAC14Q08AM6 782 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 DSC3Q14574 896 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 AAGABQ6PD74 315 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 CLEC14AQ86T13 490 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 HJURPQ8NCD3 748 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 NSMCE2Q96MF7 247 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 FAM126AQ9BYI3 521 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 POLG2Q9UHN1 485 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 ARID2Q68CP9 1835 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF195O14628 629 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 TEX28O15482 410 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 NPHS1O60500 1241 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 WDR47O94967 919 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 STATHP02808 62 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 SOAT1P35610 550 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 LIPEQ05469 1076 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 PRKG2Q13237 762 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 NKAPQ8N5F7 415 aaKnown RBP16.03■□□□□ 0.16
RAB40B-206ENST00000571995 KLK6Q92876 244 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 TCF25Q9BQ70 676 aa16.03■□□□□ 0.16
RAB40B-206ENST00000571995 PAPPA2Q9BXP8 1791 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 A0A1B0GTW7 788 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF189O75820 626 aaPredicted RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 RPL34P49207 117 aaKnown RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 TTLL9Q3SXZ7 439 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 PTCD2Q8WV60 388 aaKnown RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 HIC2Q96JB3 615 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 DYRK4Q9NR20 520 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 ADRA1AP35348 466 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 VEGFBP49765 207 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 BIRC2Q13490 618 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 WFDC5Q8TCV5 224 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 TPD52L3Q96J77 140 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 COPS8Q99627 209 aa16.02■□□□□ 0.16
RAB40B-206ENST00000571995 INTS7Q9NVH2 962 aaKnown RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 EIF3LQ9Y262 564 aaKnown RBP16.02■□□□□ 0.16
RAB40B-206ENST00000571995 HTTP42858 3142 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 PFDN1O60925 122 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 ATXN1LP0C7T5 689 aaKnown RBP16.02■□□□□ 0.15
RAB40B-206ENST00000571995 CYP4B1P13584 511 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 ADGRE1Q14246 886 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 FAM180BQ6P0A1 224 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 CLVS1Q8IUQ0 354 aaPredicted RBP16.02■□□□□ 0.15
RAB40B-206ENST00000571995 ADGRG2Q8IZP9 1017 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 PXYLP1Q8TE99 480 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 CCDC28BQ9BUN5 200 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 GSTO2Q9H4Y5 243 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 RERGLQ9H628 205 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 CFAP20Q9Y6A4 193 aaKnown RBP16.02■□□□□ 0.15
RAB40B-206ENST00000571995 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.15
RAB40B-206ENST00000571995 PLK4O00444 970 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 PCDH8O95206 1070 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CCL5P13501 91 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 HLA-EP13747 358 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 LIN52Q52LA3 116 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 SYVN1Q86TM6 617 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 PDSS2Q86YH6 399 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 LINC00597Q9H2U6 94 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 VPS9D1Q9Y2B5 631 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ASB1Q9Y576 335 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 SEC16AO15027 2179 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 TRAV19A0A0A6YYK7 116 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 FOXD2O60548 495 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CAPN3P20807 821 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 MAPKAPK2P49137 400 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ALDH9A1P49189 494 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 IRF8Q02556 426 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 RNF111Q6ZNA4 994 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 GALNT10Q86SR1 603 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 RIN3Q8TB24 985 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 FEM1AQ9BSK4 669 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CAPN10Q9HC96 672 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 MRPL40Q9NQ50 206 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 FARSBQ9NSD9 589 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms