RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RAB41Q5JT25 222 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF484Q5JVG2 852 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RNFT1Q5M7Z0 435 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SAPCD1Q5SSQ6 148 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 THEMIS2Q5TEJ8 643 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ATF7IP2Q5U623 682 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 EEF1A1P5Q5VTE0 462 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KRT39Q6A163 491 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 JADE1Q6IE81 842 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PPP1R2P3Q6NXS1 205 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PSRC1Q6PGN9 363 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 LAYNQ6UX15 382 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SCARA5Q6ZMJ2 495 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FRMD7Q6ZUT3 714 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 USP53Q70EK8 1073 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ERN2Q76MJ5 926 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 TRAPPC11Q7Z392 1133 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ANKS1BQ7Z6G8 1248 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ADAT2Q7Z6V5 191 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 PHLDB2Q86SQ0 1253 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ASPGQ86U10 573 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 BIVMQ86UB2 503 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC47A2Q86VL8 602 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZDHHC17Q8IUH5 632 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MFN1Q8IWA4 741 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZBTB8OSQ8IWT0 167 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ELMOD2Q8IZ81 293 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ADGRF2Q8IZF7 708 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CRYBG2Q8N1P7 616 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 OXR1Q8N573 874 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 WDTC1Q8N5D0 677 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC25A41Q8N5S1 370 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FAM181AQ8N9Y4 354 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KDF1Q8NAX2 398 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC17A8Q8NDX2 589 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 DNAJB8Q8NHS0 232 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMG6-208ENST00000570874 TEX47Q8TBZ9 253 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CD99L2Q8TCZ2 262 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ACTRT2Q8TDY3 377 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLC22A17Q8WUG5 538 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 UBLCP1Q8WVY7 318 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 DNAJB3Q8WWF6 145 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ASZ1Q8WWH4 475 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 NCSTNQ92542 709 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CORO2AQ92828 525 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SLAMF9Q96A28 289 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 AZIN2Q96A70 460 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ISG20Q96AZ6 181 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 RGMAQ96B86 450 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MRPL38Q96DV4 380 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 TMA16Q96EY4 203 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 CAPZA3Q96KX2 299 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CAPNS2Q96L46 248 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CCDC140Q96MF4 163 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TMEM68Q96MH6 324 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TSNARE1Q96NA8 513 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KCTD15Q96SI1 283 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 RBM15Q96T37 977 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMG6-208ENST00000570874 MMS19Q96T76 1030 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PRPF18Q99633 342 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 NAPGQ99747 312 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 AGPAT1Q99943 283 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FERMT1Q9BQL6 677 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZSWIM1Q9BR11 485 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TUBB6Q9BUF5 446 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZSCAN5AQ9BUG6 496 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 C1QTNF2Q9BXJ5 285 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TRIM54Q9BYV2 358 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 GSX2Q9BZM3 304 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 IMPG2Q9BZV3 1241 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PITHD1Q9GZP4 211 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 FAM192AQ9GZU8 254 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 TWSG1Q9GZX9 223 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 KLHL25Q9H0H3 589 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 QRSL1Q9H0R6 528 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 SDCBP2Q9H190 292 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PABPC3Q9H361 631 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 HIPK3Q9H422 1215 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 FZD8Q9H461 694 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PDZD7Q9H5P4 517 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 C12orf10Q9HB07 376 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PARVBQ9HBI1 364 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RXFP1Q9HBX9 757 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SYTL2Q9HCH5 934 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 MAGEE1Q9HCI5 957 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 LTB4R2Q9NPC1 389 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMG6-208ENST00000570874 RBM12Q9NTZ6 932 aaKnown RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 FAM86C1Q9NVL1 165 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 ZNF446Q9NWS9 450 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RNF186Q9NXI6 227 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 PAQR5Q9NXK6 330 aaPredicted RBP3.54□□□□□ -1.84
SMG6-208ENST00000570874 KLHL28Q9NXS3 571 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 CNIH4Q9P003 139 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 SENP1Q9P0U3 644 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 RNF14Q9UBS8 474 aa3.54□□□□□ -1.84
SMG6-208ENST00000570874 HESX1Q9UBX0 185 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms