RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TAF4O00268 1085 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CCL22O00626 93 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 POP7O75817 140 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CPNE6O95741 557 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 KRT14P02533 472 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 TCP1P17987 556 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 XRCC1P18887 633 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 COILP38432 576 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 LSSP48449 732 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 PDX1P52945 283 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CDK16Q00536 496 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 HHEXQ03014 270 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 DMPKQ09013 629 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CCDC173Q0VFZ6 552 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 ZRANB3Q5FWF4 1079 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 TTC27Q6P3X3 843 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CCDC137Q6PK04 289 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 ABRAXAS1Q6UWZ7 409 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 WASH2PQ6VEQ5 465 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 NLRP9Q7RTR0 991 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 NXPE1Q8N323 547 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 SGF29Q96ES7 293 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 COPS8Q99627 209 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 KCNK4Q9NYG8 393 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 CPNE7Q9UBL6 633 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 IGHV1OR21-1A0A087WYE8 117 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TRBV5-4A0A0C4DH59 114 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 GOLGA6L10A0A0M3HER8 536 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 KLHL33A6NCF5 533 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CFAP99D6REC4 459 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 ZNF185O15231 689 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 MPOP05164 745 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 ATP1B2P14415 290 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TPSB2P20231 275 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 ACRV1P26436 265 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 RPL10P27635 214 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CD1CP29017 333 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CCKBRP32239 447 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 NPY2RP49146 381 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 INHBCP55103 352 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 GNG11P61952 73 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 GABREP78334 506 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 GPLD1P80108 840 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CACNG1Q06432 222 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TPSAB1Q15661 275 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 AMZ1Q400G9 498 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 FNBP1LQ5T0N5 605 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TSTD2Q5T7W7 516 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 AGAP9Q5VTM2 703 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 DET1Q7L5Y6 550 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 TAS2R42Q7RTR8 314 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 WDR36Q8NI36 951 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 PEX13Q92968 403 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 STRADBQ9C0K7 418 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 ZDHHC3Q9NYG2 299 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 SMARCAL1Q9NZC9 954 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 SCHIP1Q9P0W5 487 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 SATB2Q9UPW6 733 aa13.58□□□□□ -0.24
HERPUD1-218ENST00000569569 CCDC78A2IDD5 438 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 MGAT4DA6NG13 374 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 BRINP1O60477 761 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 PHF2O75151 1096 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 VIPP01282 170 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 BRAFP15056 766 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 SLC19A1P41440 591 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 CDKN1CP49918 316 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 ARSDP51689 593 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 DRG2P55039 364 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 GPS1Q13098 491 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 EIF3IQ13347 325 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 BCL7AQ4VC05 210 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 C3orf38Q5JPI3 329 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 PCID2Q5JVF3 399 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 METRNLQ641Q3 311 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 LRRC8BQ6P9F7 803 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 USP53Q70EK8 1073 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 BEND7Q8N7W2 519 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-218ENST00000569569 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms