RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CTSCP53634 463 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 INHBCP55103 352 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 GABREP78334 506 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 HHEXQ03014 270 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 CDH17Q12864 832 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 LAMB3Q13751 1172 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 BCL7AQ4VC05 210 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 TMEM71Q6P5X7 295 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 FAM151BQ6UXP7 276 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ARHGAP22Q7Z5H3 698 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 RBM12BQ8IXT5 1001 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 NXPE1Q8N323 547 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 PRELID2Q8N945 189 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 OR13C4Q8NGS5 318 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 HEXDCQ8WVB3 486 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SNRNP27Q8WVK2 155 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ULK4Q96C45 1275 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ZCCHC2Q9C0B9 1178 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 STRADBQ9C0K7 418 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 RAB33BQ9H082 229 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SEMA6CQ9H3T2 930 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ASB8Q9H765 288 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC40A1Q9NP59 571 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 PRDM8Q9NQV8 689 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 KLC4Q9NSK0 619 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SEMA5BQ9P283 1151 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 CPNE7Q9UBL6 633 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 FKBPLQ9UIM3 349 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF148Q9UQR1 794 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 KCNK6Q9Y257 313 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 AK5Q9Y6K8 562 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 FAM208BQ5VWN6 2430 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SPTBP11277 2137 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 LOC400499M0QZD8 3231 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 CHD6Q8TD26 2715 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 NBEAQ8NFP9 2946 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 IGHV5-10-1A0A0J9YXX1 117 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 MGAT4DA6NG13 374 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 PLD2O14939 933 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 GPR39O43194 453 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC4A1P02730 911 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 C9P02748 559 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 PTMAP06454 111 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 GSTM1P09488 218 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 THRAP10827 490 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ATP1B2P14415 290 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ETS1P14921 441 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 TPH1P17752 444 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 IDSP22304 550 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ADRA1DP25100 572 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ALDH4A1P30038 563 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 CSF2RBP32927 897 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 GRIA1P42261 906 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 CDK16Q00536 496 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 GSTM4Q03013 218 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 CLCA4Q14CN2 919 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 LONRF2Q1L5Z9 754 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 SKIDA1Q1XH10 827 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 CAPRIN2Q6IMN6 1127 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 TMEM220Q6QAJ8 160 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 TMEM26Q6ZUK4 368 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 RAB11FIP2Q7L804 512 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 NLRP9Q7RTR0 991 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 AMZ2Q86W34 360 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 FBXO39Q8N4B4 442 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 Q8N9G6 341 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 OR52K1Q8NGK4 314 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 OR13J1Q8NGT2 312 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ACTRT1Q8TDG2 376 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 DNAJC1Q96KC8 554 aaKnown RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 NUDT22Q9BRQ3 303 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 DPH1Q9BZG8 443 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 THSD1Q9NS62 852 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 POT1Q9NUX5 634 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 KCNK4Q9NYG8 393 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 OGFRQ9NZT2 677 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 EPHA6Q9UF33 1036 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ACSL5Q9ULC5 683 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 WDR37Q9Y2I8 494 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
HDGFL3-205ENST00000568129 MN1Q10571 1320 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 HEATR9A2RTY3 570 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PMS2P1A4D2B8 440 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 B4E171 279 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 AP3B1O00203 1094 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TOX3O15405 576 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ZSCAN12O43309 604 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CEP104O60308 925 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 AP2A2O94973 939 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 IFNB1P01574 187 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ANKRD34CP0C6C1 535 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ZSCAN5DPP0CG00 497 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 VCLP18206 1134 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TPSB2P20231 275 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms