RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 IDSP22304 550 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 MPSTP25325 297 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PSMB4P28070 264 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CSTF2P33240 577 aaKnown RBP eCLIP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SLC19A1P41440 591 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 EPHA4P54764 986 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 GSDMDP57764 484 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PDE1BQ01064 536 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CLN3Q13286 438 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ITGA9Q13797 1035 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PTPRCAPQ14761 206 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PARP6Q2NL67 630 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 AGAP9Q5VTM2 703 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM220Q6QAJ8 160 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ABRAXAS1Q6UWZ7 409 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 FAM151BQ6UXP7 276 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 WASH2PQ6VEQ5 465 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CCDC81Q6ZN84 652 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TRAPPC5Q8IUR0 188 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF547Q8IVP9 402 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 RASGEF1AQ8N9B8 481 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 LSM14AQ8ND56 463 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 RCBTB1Q8NDN9 531 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 OR4K2Q8NGD2 314 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CCDC110Q8TBZ0 833 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF398Q8TD17 642 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SNRNP27Q8WVK2 155 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 LRRC45Q96CN5 670 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 HES6Q96HZ4 224 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SPATA13Q96N96 652 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TAAR9Q96RI9 348 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 CCNL2Q96S94 520 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 APOL2Q9BQE5 337 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 GORASP1Q9BQQ3 440 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TIMM29Q9BSF4 260 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ZCCHC2Q9C0B9 1178 aaKnown RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 EPB41L1Q9H4G0 881 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 UCK1Q9HA47 277 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ARNT2Q9HBZ2 717 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 WASH6PQ9NQA3 447 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 WDR70Q9NW82 654 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SLC39A1Q9NY26 324 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM9Q9P0T7 183 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF624Q9P2J8 865 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 PACSIN2Q9UNF0 486 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 DNAJC16Q9Y2G8 782 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 ARL5AQ9Y689 179 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-209ENST00000567635 BAHCC1Q9P281 2608 aa6.81□□□□□ -1.32
SF3B3-209ENST00000567635 SNRNP200O75643 2136 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ANKRD12Q6UB98 2062 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 LILRA5A6NI73 299 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 A8MU76 341 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 PDZK1P1A8MUH7 402 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 B4E171 279 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 C9orf172C9J069 976 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 K7ENP7 123 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 GAPDHSO14556 408 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 KRT86O43790 486 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 POP7O75817 140 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 VIPP01282 170 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 LIPCP11150 499 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 AMD1P17707 334 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 RPL10P27635 214 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 CD82P27701 267 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 CSF2RBP32927 897 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 TSPAN7P41732 249 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 MAPK9P45984 424 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 DRG2P55039 364 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 UBE2IP63279 158 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 RHDQ02161 417 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 KLF1Q13351 362 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 MSLNQ13421 630 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 OLIG2Q13516 323 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 SPARCL1Q14515 664 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 TGIF1Q15583 401 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 SNAP47Q5SQN1 464 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 GPRC6AQ5T6X5 926 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 DENND5AQ6IQ26 1287 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 INO80CQ6PI98 192 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM26Q6ZUK4 368 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ARHGAP22Q7Z5H3 698 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 MTERF4Q7Z6M4 381 aaKnown RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 C11orf96Q7Z7L8 435 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 AMZ2Q86W34 360 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 PLXDC1Q8IUK5 500 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 FAM71DQ8N9W8 422 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 CCDC112Q8NEF3 446 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 DDHD1Q8NEL9 900 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ART4Q93070 314 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF514Q96K75 400 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 C19orf43Q9BQ61 176 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms