RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
PALB2-205ENST00000567003 TMPRSS11EQ9UL52 423 aa15.2■□□□□ 0.02
PALB2-205ENST00000567003 MAP4K5Q9Y4K4 846 aa15.2■□□□□ 0.02
PALB2-205ENST00000567003 SPTBP11277 2137 aa15.2■□□□□ 0.02
PALB2-205ENST00000567003 C21orf140B9A014 251 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 SORBS2O94875 1100 aaKnown RBP15.19■□□□□ 0.02
PALB2-205ENST00000567003 MRPL49Q13405 166 aaKnown RBP15.19■□□□□ 0.02
PALB2-205ENST00000567003 LAMB3Q13751 1172 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 UGT8Q16880 541 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 CCDC183Q5T5S1 534 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 FAM69BQ5VUD6 431 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 ZNF787Q6DD87 383 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 ABRAXAS1Q6UWZ7 409 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 TTC30BQ8N4P2 665 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 CNTD1Q8N815 330 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 CCNYQ8ND76 341 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 ZDHHC12Q96GR4 267 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 ZSCAN5AQ9BUG6 496 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 PDE7BQ9NP56 450 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 CASS4Q9NQ75 786 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 AMACRQ9UHK6 382 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 RARRES3Q9UL19 164 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 ZNF711Q9Y462 761 aa15.19■□□□□ 0.02
PALB2-205ENST00000567003 CSMD1Q96PZ7 3565 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
PALB2-205ENST00000567003 MT-ND3P03897 115 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 BPIP17213 487 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 PTPN4P29074 926 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 PTGIRP43119 386 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 TAS2R40P59535 323 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 DCDC1P59894 354 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 PCSK7Q16549 785 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 EIF2S3LQ2VIR3 472 aaKnown RBP15.18■□□□□ 0.02
PALB2-205ENST00000567003 C11orf96Q7Z7L8 435 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 TRAPPC5Q8IUR0 188 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 FATE1Q969F0 183 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 SLC41A2Q96JW4 573 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 TRIB3Q96RU7 358 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 MAP3K3Q99759 626 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 ADGRE3Q9BY15 652 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 BPIFA1Q9NP55 256 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 ACSS2Q9NR19 701 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 EPHA6Q9UF33 1036 aa15.18■□□□□ 0.02
PALB2-205ENST00000567003 GPR89AB7ZAQ6 455 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 AURKAO14965 403 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 CDK14O94921 469 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 CYP1A2P05177 515 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 GPR89BP0CG08 455 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 IDSP22304 550 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 INPP5JQ15735 1006 aaPredicted RBP15.17■□□□□ 0.02
PALB2-205ENST00000567003 PRAMEF17Q5VTA0 474 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 AGAP9Q5VTM2 703 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 HGSNATQ68CP4 663 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 FBXO38Q6PIJ6 1188 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 B4GALNT4Q76KP1 1039 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 TMC3Q7Z5M5 1100 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 Q8NA96 180 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 KCTD6Q8NC69 237 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 MR1Q95460 341 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 NAP1L5Q96NT1 182 aaPredicted RBP15.17■□□□□ 0.02
PALB2-205ENST00000567003 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 GPR63Q9BZJ6 419 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 ING2Q9H160 280 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 HAUS2Q9NVX0 235 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 MAP10Q9P2G4 905 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 SPO11Q9Y5K1 396 aa15.17■□□□□ 0.02
PALB2-205ENST00000567003 PCSK5Q92824 1860 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 GPR39O43194 453 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 RECKO95980 971 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 CA5AP35218 305 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 GPS2Q13227 327 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 GPR19Q15760 415 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 HADHQ16836 314 aaKnown RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 ATP13A5Q4VNC0 1218 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 LCN10Q6JVE6 187 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 WASH2PQ6VEQ5 465 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 FAM83HQ6ZRV2 1179 aaPredicted RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 SYVN1Q86TM6 617 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 SLC38A9Q8NBW4 561 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 THAP4Q8WY91 577 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 UBXN4Q92575 508 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 HDAC11Q96DB2 347 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 ZNF514Q96K75 400 aaPredicted RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 MLXIPLQ9NP71 852 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 WASH6PQ9NQA3 447 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 FGF21Q9NSA1 209 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 SEMA5BQ9P283 1151 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 NFKBIL1Q9UBC1 381 aaPredicted RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 PCDHGA9Q9Y5G4 932 aaKnown RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 CFAP20Q9Y6A4 193 aaKnown RBP15.16■□□□□ 0.02
PALB2-205ENST00000567003 ABCA12Q86UK0 2595 aa15.16■□□□□ 0.02
PALB2-205ENST00000567003 MYO1FO00160 1098 aa15.15■□□□□ 0.02
PALB2-205ENST00000567003 VEGFDO43915 354 aa15.15■□□□□ 0.02
PALB2-205ENST00000567003 MX2P20592 715 aa15.15■□□□□ 0.02
PALB2-205ENST00000567003 FECHP22830 423 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms