RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SPATA2LQ8IUW3 424 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF555Q8NEP9 628 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 S100ZQ8WXG8 99 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 PTPN18Q99952 460 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 MTG1Q9BT17 334 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-208ENST00000566339 TMLHEQ9NVH6 421 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 MIOSQ9NXC5 875 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 CENPFP49454 3210 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 DRGXA6NNA5 263 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 MSI1O43347 362 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 IL1RNP18510 177 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 EEF1B2P24534 225 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 MAPKAPK2P49137 400 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 UFM1P61960 85 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 RFX4Q33E94 735 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 C6orf136Q5SQH8 315 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 GPRIN3Q6ZVF9 776 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 SYVN1Q86TM6 617 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 SCAMP5Q8TAC9 235 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ITFG1Q8TB96 612 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 GIPC2Q8TF65 315 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 PARK7Q99497 189 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 NAA50Q9GZZ1 169 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 OR51F1A6NGY5 319 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 MGEA5O60502 916 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF623O75123 536 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 NDST3O95803 873 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ALDH1A1P00352 501 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 NCK1P16333 377 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF182P17025 639 aaPredicted RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 CDH3P22223 829 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 TBX4P57082 545 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 MAXP61244 160 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ATP6AP1LQ52LC2 224 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ZC3H12BQ5HYM0 836 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 DLEU7Q6UYE1 221 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 ZC3H7AQ8IWR0 971 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 SPARTQ8N0X7 666 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 CARNMT1Q8N4J0 409 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 PIK3C3Q8NEB9 887 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 PROKR1Q8TCW9 393 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 PPP1R13LQ8WUF5 828 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 MUL1Q969V5 352 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 TMBIM1Q969X1 311 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 FUBP1Q96AE4 644 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 VPS33AQ96AX1 596 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 VMP1Q96GC9 406 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 RBM4BQ9BQ04 359 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 HGH1Q9BTY7 390 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 RBM4Q9BWF3 364 aaKnown RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 SEMA4BQ9NPR2 832 aaPredicted RBP21.36■■□□□ 1.01
SPSB3-208ENST00000566339 SMPD4Q9NXE4 827 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 PCDHGB1Q9Y5G3 927 aa21.36■■□□□ 1.01
SPSB3-208ENST00000566339 NLRC5Q86WI3 1866 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 LRRC14BA6NHZ5 514 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 ALOX5P09917 674 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF865P0CJ78 1059 aaPredicted RBP21.35■■□□□ 1.01
SPSB3-208ENST00000566339 POLR2IP36954 125 aaKnown RBP21.35■■□□□ 1.01
SPSB3-208ENST00000566339 OCA2Q04671 838 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 SERINC3Q13530 473 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 PLCL1Q15111 1095 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 C6orf141Q5SZD1 244 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 MORN1Q5T089 497 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 OVOS1Q6IE37 1185 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 TBPL2Q6SJ96 375 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 ANKRD13BQ86YJ7 626 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 CLEC4FQ8N1N0 589 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 DNAJB8Q8NHS0 232 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF296Q8WUU4 475 aaPredicted RBP21.35■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF566Q969W8 418 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 CDKN2AIPNLQ96HQ2 116 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 CGREF1Q99674 301 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 SH3GL1Q99961 368 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 OSBPL10Q9BXB5 764 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 FBXO44Q9H4M3 255 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 HMG20AQ9NP66 347 aa21.35■■□□□ 1.01
SPSB3-208ENST00000566339 DOCK3Q8IZD9 2030 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 CLDN25C9JDP6 229 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 K7EPI3 171 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 SYNCRIPO60506 623 aaKnown RBP21.34■■□□□ 1.01
SPSB3-208ENST00000566339 MOCS2O96007 188 aaPredicted RBP21.34■■□□□ 1.01
SPSB3-208ENST00000566339 UGT2B4P06133 528 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 HAPLN1P10915 354 aaPredicted RBP21.34■■□□□ 1.01
SPSB3-208ENST00000566339 PCSK2P16519 638 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 MSH3P20585 1137 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 JAK1P23458 1154 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 SHMT2P34897 504 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 ETFBP38117 255 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 OR4D2P58180 307 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 SEMA3AQ14563 771 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 IHHQ14623 411 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 MS4A13Q5J8X5 152 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 PAQR3Q6TCH7 311 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 AGMOQ6ZNB7 445 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 PARP8Q8N3A8 854 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 PGBD5Q8N414 524 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 SLC15A4Q8N697 577 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 PSMG2Q969U7 264 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 SUSD3Q96L08 255 aa21.34■■□□□ 1.01
SPSB3-208ENST00000566339 TEX37Q96LM6 180 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms