RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 DAAM2Q86T65 1068 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 PLXDC1Q8IUK5 500 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 TRAPPC5Q8IUR0 188 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 TRIM48Q8IWZ4 208 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 GDAP1Q8TB36 358 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 DTX3LQ8TDB6 740 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A7Q9HAW7 530 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A10Q9HAW8 530 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A8Q9HAW9 530 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 WASH6PQ9NQA3 447 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 SIDT1Q9NXL6 827 aaKnown RBP18.01■□□□□ 0.47
USB1-213ENST00000566292 HACD3Q9P035 362 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 RSPH14Q9UHP6 348 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 TRHDEQ9UKU6 1024 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 WDR37Q9Y2I8 494 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
USB1-213ENST00000566292 SETXQ7Z333 2677 aaKnown RBP18.01■□□□□ 0.47
USB1-213ENST00000566292 APOC4-APOC2K7ER74 178 aa18■□□□□ 0.47
USB1-213ENST00000566292 UBXN7O94888 489 aa18■□□□□ 0.47
USB1-213ENST00000566292 APOC2P02655 101 aa18■□□□□ 0.47
USB1-213ENST00000566292 ITGB6P18564 788 aa18■□□□□ 0.47
USB1-213ENST00000566292 IDSP22304 550 aa18■□□□□ 0.47
USB1-213ENST00000566292 CYLC1P35663 651 aaPredicted RBP18■□□□□ 0.47
USB1-213ENST00000566292 CTSCP53634 463 aa18■□□□□ 0.47
USB1-213ENST00000566292 NFATC3Q12968 1075 aa18■□□□□ 0.47
USB1-213ENST00000566292 XRCC4Q13426 336 aa18■□□□□ 0.47
USB1-213ENST00000566292 GTF2H3Q13889 308 aa18■□□□□ 0.47
USB1-213ENST00000566292 CLCA4Q14CN2 919 aa18■□□□□ 0.47
USB1-213ENST00000566292 ZDHHC20Q5W0Z9 365 aa18■□□□□ 0.47
USB1-213ENST00000566292 BRSK1Q8TDC3 778 aa18■□□□□ 0.47
USB1-213ENST00000566292 C9orf72Q96LT7 481 aa18■□□□□ 0.47
USB1-213ENST00000566292 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
USB1-213ENST00000566292 POT1Q9NUX5 634 aa18■□□□□ 0.47
USB1-213ENST00000566292 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
USB1-213ENST00000566292 SPTA1P02549 2419 aa18■□□□□ 0.47
USB1-213ENST00000566292 GLYATL1P3A0A0U1RQE8 302 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 SOWAHDA6NJG2 315 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 H7C0C1 242 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 AGTP01019 485 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 AMD1P17707 334 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 CTNNA1P35221 906 aaKnown RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 ATP5OP48047 213 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 LEPRP48357 1165 aaKnown RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 GPR18Q14330 331 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 PTPRCAPQ14761 206 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 NLGN4XQ8N0W4 816 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 RASGEF1AQ8N9B8 481 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 DDHD1Q8NEL9 900 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 NLGN4YQ8NFZ3 816 aaPredicted RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 RSC1A1Q92681 617 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 TGM7Q96PF1 710 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 ZPBPQ9BS86 351 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 GBA3Q9H227 469 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.99■□□□□ 0.47
USB1-213ENST00000566292 TMEM184BQ9Y519 407 aaPredicted RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 PCDHA3Q9Y5H8 950 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 EPN1Q9Y6I3 576 aaPredicted RBP17.99■□□□□ 0.47
USB1-213ENST00000566292 DUSP10Q9Y6W6 482 aa17.99■□□□□ 0.47
USB1-213ENST00000566292 LOC101059948A0A1B0GTJ6 334 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 PYCARD-AS1I3L0S3 204 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 CAPN5O15484 640 aaPredicted RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 STK17BO94768 372 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 NDUFA10O95299 355 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 DLGAP3O95886 979 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 VCLP18206 1134 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 FECHP22830 423 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 COPS2P61201 443 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 OTUD4Q01804 1114 aaKnown RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 OLIG2Q13516 323 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 LDLRAP1Q5SW96 308 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 GPRC6AQ5T6X5 926 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 FAM83HQ6ZRV2 1179 aaPredicted RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 ACTL9Q8TC94 416 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 TTC25Q96NG3 672 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 PANX2Q96RD6 677 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 FICDQ9BVA6 458 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 FSD1LQ9BXM9 530 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 LUC7LQ9NQ29 371 aaKnown RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 STARD5Q9NSY2 213 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 REXO2Q9Y3B8 237 aaKnown RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 PKP3Q9Y446 797 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 ARL5AQ9Y689 179 aa17.98■□□□□ 0.47
USB1-213ENST00000566292 FLNBO75369 2602 aaKnown RBP17.98■□□□□ 0.47
USB1-213ENST00000566292 ASH1LQ9NR48 2969 aaKnown RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 MYO18BQ8IUG5 2567 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 OR2AG2A6NM03 316 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 POLR1CO15160 346 aaPredicted RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 PJA2O43164 708 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 SLC28A2O43868 658 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 KCNJ13O60928 360 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 POP7O75817 140 aaKnown RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 MAP4P27816 1152 aaKnown RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 ADRA1AP35348 466 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 CAPZBP47756 277 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 ZNF75DP51815 510 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 GEMP55040 296 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 DMPKQ09013 629 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 ITGA9Q13797 1035 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 TMEM220Q6QAJ8 160 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms