RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PCID2Q5JVF3 399 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SYDE1Q6ZW31 735 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SNX20Q7Z614 316 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 JAMLQ86YT9 394 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 TRAPPC5Q8IUR0 188 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 ZNF547Q8IVP9 402 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SFRP1Q8N474 314 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 NAT8LQ8N9F0 302 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 MCUQ8NE86 351 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 PPHLN1Q8NEY8 458 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 IL22Q9GZX6 179 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 FAM96AQ9H5X1 160 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 CHRAC1Q9NRG0 131 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 BFARQ9NZS9 450 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SLC23A2Q9UGH3 650 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 ASIC3Q9UHC3 531 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 CRLS1Q9UJA2 301 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 PCDHB1Q9Y5F3 818 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 ENTPD2Q9Y5L3 495 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 DNMT3AQ9Y6K1 912 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 SLC30A1Q9Y6M5 507 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 CACNA1BQ00975 2339 aa13.62□□□□□ -0.23
HERPUD1-210ENST00000565966 TRBV5-4A0A0C4DH59 114 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 KIR2DS5A0A0G2JLQ3 304 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 A0A0G2JNG1 304 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 CCDC162PA2VCL2 907 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 KIR2DS3K7RE56 304 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 B4GAT1O43505 415 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 SNX2O60749 519 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 EML2O95834 649 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 VCLP18206 1134 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 MSH3P20585 1137 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 IVDP26440 423 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 ALDH4A1P30038 563 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 AKT1P31749 480 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 CDKN1CP49918 316 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 DR1Q01658 176 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 ACVR1Q04771 509 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 KIR2DS5Q14953 304 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 PLA2G4EQ3MJ16 856 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 ZRANB3Q5FWF4 1079 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 TMEM220Q6QAJ8 160 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 C11orf96Q7Z7L8 435 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 SLC9B2Q86UD5 537 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 NXPE1Q8N323 547 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 SLC37A2Q8TED4 501 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 HDAC10Q969S8 669 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 ULK4Q96C45 1275 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 ZNF514Q96K75 400 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 KRT12Q99456 494 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 OSGEPL1Q9H4B0 414 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 STN1Q9H668 368 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 PRDM8Q9NQV8 689 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 SYBUQ9NX95 663 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
HERPUD1-210ENST00000565966 USP24Q9UPU5 2620 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 A6NCN8 305 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 OR51F1A6NGY5 319 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 OR2AG2A6NM03 316 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 D6RAR5 112 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 TTI1O43156 1089 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 AVILO75366 819 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 GOT2P00505 430 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 RALBP11234 206 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 MLNP12872 115 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 IDSP22304 550 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 FOXN2P32314 431 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 CTSCP53634 463 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 OR1D5P58170 312 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 CACNG1Q06432 222 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 PIM3Q86V86 326 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 AMZ2Q86W34 360 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 PROSER1Q86XN7 944 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 PIANPQ8IYJ0 282 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 MPP5Q8N3R9 675 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 AVL9Q8NBF6 648 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 HEXDCQ8WVB3 486 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 PEX13Q92968 403 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
HERPUD1-210ENST00000565966 CCDC97Q96F63 343 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms