RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 ZNF185O15231 689 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 KCNJ13O60928 360 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CPNE6O95741 557 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CAPNS1P04632 268 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 TCP1P17987 556 aaKnown RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 ADRA1DP25100 572 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 RPL10P27635 214 aaKnown RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 COILP38432 576 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 PDX1P52945 283 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CACNG1Q06432 222 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 KCTD19Q17RG1 926 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 FOXR1Q6PIV2 292 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CCDC137Q6PK04 289 aaKnown RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 B3GNT8Q7Z7M8 397 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 PIM3Q86V86 326 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 TRIM48Q8IWZ4 208 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 PPHLN1Q8NEY8 458 aaKnown RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 SGF29Q96ES7 293 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 AHCYL2Q96HN2 611 aaKnown RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 POLR1BQ9H9Y6 1135 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 RDH14Q9HBH5 336 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CPNE7Q9UBL6 633 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 SATB2Q9UPW6 733 aa18.4■□□□□ 0.54
CMTM3-210ENST00000565666 DNMT3AQ9Y6K1 912 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-210ENST00000565666 CCDC187A0A096LP49 1063 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 AP3B1O00203 1094 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 BRINP1O60477 761 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 PHF2O75151 1096 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 HALP42357 657 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 CDKN1CP49918 316 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 DRG2P55039 364 aaKnown RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 SESN2P58004 480 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 GPS1Q13098 491 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 CYP1B1Q16678 543 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 TSTD2Q5T7W7 516 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 USP53Q70EK8 1073 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 SERPINA9Q86WD7 417 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 BEND7Q8N7W2 519 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 OR10G6Q8NH81 332 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 WDR36Q8NI36 951 aaKnown RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 NAT14Q8WUY8 206 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 ZDHHC3Q9NYG2 299 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 SCHIP1Q9P0W5 487 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-210ENST00000565666 FAM8A1Q9UBU6 413 aa18.39■□□□□ 0.53
CMTM3-210ENST00000565666 IGHV1OR21-1A0A087WYE8 117 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 VIPP01282 170 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 TPSB2P20231 275 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 ACRV1P26436 265 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 CD1CP29017 333 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 CCKBRP32239 447 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 MAPK9P45984 424 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 LSSP48449 732 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 ARSDP51689 593 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 DMPKQ09013 629 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 NFE2L1Q14494 772 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 TPSAB1Q15661 275 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 CLPPQ16740 277 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-210ENST00000565666 PHF19Q5T6S3 580 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 NKAIN2Q5VXU1 208 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 ABRAXAS1Q6UWZ7 409 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 MICALCLQ6ZW33 695 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 NLRP9Q7RTR0 991 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 LSMEM2Q8N112 164 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 GRK7Q8WTQ7 553 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.38■□□□□ 0.53
CMTM3-210ENST00000565666 CXorf40BQ96DE9 158 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 LIN37Q96GY3 246 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-210ENST00000565666 NAPGQ99747 312 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-210ENST00000565666 BFARQ9NZS9 450 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 TCAF1Q9Y4C2 921 aa18.38■□□□□ 0.53
CMTM3-210ENST00000565666 TPRP12270 2363 aaKnown RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 MAP1BP46821 2468 aaKnown RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 TRBV5-4A0A0C4DH59 114 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 CCDC162PA2VCL2 907 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 MGAT4DA6NG13 374 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 OR51F1A6NGY5 319 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 PRR19A6NJB7 356 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 AGRPO00253 132 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 TAF4O00268 1085 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 DUX1O43812 170 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 PRSS56P0CW18 603 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 XRCC1P18887 633 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 RBMS1P29558 406 aaKnown RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 NPY2RP49146 381 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 PRAMEP78395 509 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 GPLD1P80108 840 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 SARNPP82979 210 aaKnown RBP18.37■□□□□ 0.53
CMTM3-210ENST00000565666 CDK16Q00536 496 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 BCL7AQ4VC05 210 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 PCID2Q5JVF3 399 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 AGAP9Q5VTM2 703 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 AFTPHQ6ULP2 937 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 WASH2PQ6VEQ5 465 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 OR13J1Q8NGT2 312 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 HDAC10Q969S8 669 aa18.37■□□□□ 0.53
CMTM3-210ENST00000565666 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms