RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SLC25A18Q9H1K4 315 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
CLN6-204ENST00000564752 SLC23A2Q9UGH3 650 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 TRHDEQ9UKU6 1024 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 MAST4O15021 2626 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 SUV39H1O43463 412 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 BPIP17213 487 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 MAP4P27816 1152 aaKnown RBP18.21■□□□□ 0.51
CLN6-204ENST00000564752 RBL1P28749 1068 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 BORAQ6PGQ7 559 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 PEX26Q7Z412 305 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 PLXDC1Q8IUK5 500 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 CDKL3Q8IVW4 592 aaPredicted RBP18.21■□□□□ 0.51
CLN6-204ENST00000564752 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 NLGN4XQ8N0W4 816 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 IPMKQ8NFU5 416 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 NLGN4YQ8NFZ3 816 aaPredicted RBP18.21■□□□□ 0.51
CLN6-204ENST00000564752 ALG3Q92685 438 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 OXNAD1Q96HP4 312 aaPredicted RBP18.21■□□□□ 0.51
CLN6-204ENST00000564752 SLC45A3Q96JT2 553 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 FSD1LQ9BXM9 530 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 ADNPQ9H2P0 1102 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 APMAPQ9HDC9 416 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.51
CLN6-204ENST00000564752 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 PRR19A6NJB7 356 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ZNF891A8MT65 544 aaPredicted RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 TERTO14746 1132 aaKnown RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 KMOO15229 486 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 PPFIA2O75334 1257 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 TJP3O95049 919 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ZNF7P17097 686 aaPredicted RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 SLC19A1P41440 591 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 CSRP3P50461 194 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 EIF3EP60228 445 aaKnown RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 MPP3Q13368 585 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ITPRIPL1Q6GPH6 555 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 CRTC3Q6UUV7 619 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ATG14Q6ZNE5 492 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 TMEM26Q6ZUK4 368 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 TIPARPQ7Z3E1 657 aaKnown RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 GBA3Q9H227 469 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 C10orf88Q9H8K7 445 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 OGFRQ9NZT2 677 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 ZNF624Q9P2J8 865 aaPredicted RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 IL17BQ9UHF5 180 aa18.2■□□□□ 0.5
CLN6-204ENST00000564752 TMEM184BQ9Y519 407 aaPredicted RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 MN1Q10571 1320 aaPredicted RBP18.2■□□□□ 0.5
CLN6-204ENST00000564752 LOC101059948A0A1B0GTJ6 334 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 MIF4GDA9UHW6 222 aaKnown RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 AURKAO14965 403 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 VEGFDO43915 354 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 STK10O94804 968 aaKnown RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 EPOP01588 193 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 C9P02748 559 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 ANKRD34CP0C6C1 535 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 RBP3P10745 1247 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 PYGMP11217 842 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 CHRNA4P43681 627 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 INSCQ1MX18 579 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 AADACL2Q6P093 401 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 LRRTM4Q86VH4 590 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 ZNF547Q8IVP9 402 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 MRGPRX2Q96LB1 330 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 FAM118BQ9BPY3 351 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 TIMM29Q9BSF4 260 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 TRIT1Q9H3H1 467 aaKnown RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 TRABDQ9H4I3 376 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 GPN2Q9H9Y4 310 aaPredicted RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 SIDT1Q9NXL6 827 aaKnown RBP18.19■□□□□ 0.5
CLN6-204ENST00000564752 TMPRSS11EQ9UL52 423 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 SLC30A1Q9Y6M5 507 aa18.19■□□□□ 0.5
CLN6-204ENST00000564752 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 NKX2-8O15522 239 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 MTX2O75431 263 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 STK17BO94768 372 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 UBXN7O94888 489 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 CDK14O94921 469 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 DLGAP3O95886 979 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 FTCDO95954 541 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 VIPP01282 170 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 GEMP55040 296 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 GFERP55789 205 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 POLE2P56282 527 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 ABHD18Q0P651 414 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 PLA2G4EQ3MJ16 856 aa18.18■□□□□ 0.5
CLN6-204ENST00000564752 KHDC1Q4VXA5 237 aaKnown RBP18.18■□□□□ 0.5
CLN6-204ENST00000564752 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms