RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SEPT6Q14141 434 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 SEPT7Q16181 437 aaKnown RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 TMEM220Q6QAJ8 160 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 TMPRSS9Q7Z410 1059 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 AMZ2Q86W34 360 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 SLITRK4Q8IW52 837 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 TRIM48Q8IWZ4 208 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 DNAAF3Q8N9W5 541 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF248Q8NDW4 579 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ANP32BQ92688 251 aaKnown RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 NUDT22Q9BRQ3 303 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 LOXL2Q9Y4K0 774 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 DNMT3AQ9Y6K1 912 aaPredicted RBP18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 SLC30A1Q9Y6M5 507 aa18.06■□□□□ 0.48
SYNGR3-204ENST00000564642 ACACAQ13085 2346 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 WDFY3Q8IZQ1 3526 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 PMS2P1A4D2B8 440 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 DUX1O43812 170 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 POP7O75817 140 aaKnown RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 VIPP01282 170 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 ITGA2BP08514 1039 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 ETS1P14921 441 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 XRCC1P18887 633 aaPredicted RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 ITGALP20701 1170 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 RPL10P27635 214 aaKnown RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 CXCR5P32302 372 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 CA5AP35218 305 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 LIMK2P53671 638 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 XIAPP98170 497 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 CCDC173Q0VFZ6 552 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 POU6F1Q14863 301 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 COL28A1Q2UY09 1125 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 PPP1R21Q6ZMI0 780 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 C11orf96Q7Z7L8 435 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 STYXQ8WUJ0 223 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 ULK4Q96C45 1275 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 DCUN1D1Q96GG9 259 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 NAF1Q96HR8 494 aaKnown RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF514Q96K75 400 aaPredicted RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 PIH1D1Q9NWS0 290 aaKnown RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 PAK5Q9P286 719 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 LHX6Q9UPM6 363 aa18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 DRG1Q9Y295 367 aaKnown RBP18.05■□□□□ 0.48
SYNGR3-204ENST00000564642 DMXL2Q8TDJ6 3036 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 CDRT15L2A8MXV6 281 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 RALBP11234 206 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 HGFP14210 728 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 CTSCP53634 463 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 CDH17Q12864 832 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 SIX1Q15475 284 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 FNBP1LQ5T0N5 605 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 TMEM71Q6P5X7 295 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 DRICH1Q6PGQ1 229 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 ABRAXAS1Q6UWZ7 409 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 WASH2PQ6VEQ5 465 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF574Q6ZN55 896 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 DET1Q7L5Y6 550 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 GSTA5Q7RTV2 222 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 SNX20Q7Z614 316 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 JAMLQ86YT9 394 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 OR4D9Q8NGE8 314 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 OR52K1Q8NGK4 314 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 CCDC97Q96F63 343 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 DNAJC1Q96KC8 554 aaKnown RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 WASH6PQ9NQA3 447 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 RAB6BQ9NRW1 208 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 NLE1Q9NVX2 485 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 SCHIP1Q9P0W5 487 aaPredicted RBP18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 PISDQ9UG56 409 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 JRKLQ9Y4A0 524 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 MAST4O15021 2626 aa18.04■□□□□ 0.48
SYNGR3-204ENST00000564642 IGHV5-10-1A0A0J9YXX1 117 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 CCL22O00626 93 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 ITPKBP27987 946 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 MC4RP32245 332 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 HALP42357 657 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 MAPK9P45984 424 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 EPHA4P54764 986 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 DRG2P55039 364 aaKnown RBP18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 TRA2AQ13595 282 aaKnown RBP eCLIP18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 LAMB3Q13751 1172 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 GPR33Q49SQ1 333 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 ZRANB3Q5FWF4 1079 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 AGAP9Q5VTM2 703 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 C4orf22Q6V702 233 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 PRUNE1Q86TP1 453 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 HEXDCQ8WVB3 486 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 KCNE4Q8WWG9 221 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 NCSTNQ92542 709 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 CXorf40BQ96DE9 158 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 SGF29Q96ES7 293 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 CCDC74BQ96LY2 380 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 FAM96AQ9H5X1 160 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 ASH1LQ9NR48 2969 aaKnown RBP18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 HOMER3Q9NSC5 361 aa18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 ZNF624Q9P2J8 865 aaPredicted RBP18.03■□□□□ 0.48
SYNGR3-204ENST00000564642 APC2O95996 2303 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms