RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 AP3B1O00203 1094 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 GPR39O43194 453 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 B4GAT1O43505 415 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 LDB2O43679 373 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 DUX1O43812 170 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 JMJD7P0C870 316 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 RPL10P27635 214 aaKnown RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 RPL22P35268 128 aaKnown RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 MAPK9P45984 424 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 KCNJ1P48048 391 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF140P52738 457 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 SEMA5AQ13591 1074 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 SIX1Q15475 284 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 GPR33Q49SQ1 333 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 KHDC1Q4VXA5 237 aaKnown RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 RAB11FIP2Q7L804 512 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF438Q7Z4V0 828 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 PRUNE1Q86TP1 453 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF761Q86XN6 746 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 RASGEF1AQ8N9B8 481 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.45□□□□□ -0.263e-9■■■■■ 78.5
CNOT1-206ENST00000564557 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 CXorf40BQ96DE9 158 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 LIN37Q96GY3 246 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 TTC1Q99614 292 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 COPS8Q99627 209 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 CMKLR1Q99788 373 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 NLE1Q9NVX2 485 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-206ENST00000564557 CPNE7Q9UBL6 633 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 SLC23A2Q9UGH3 650 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 CEP295Q9C0D2 2601 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
CNOT1-206ENST00000564557 GOLGA6L10A0A0M3HER8 536 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 AGRPO00253 132 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 PGRMC1O00264 195 aaKnown RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 TAF4O00268 1085 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CCL22O00626 93 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 GAPDHSO14556 408 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 PLD2O14939 933 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CASC3O15234 703 aaKnown RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 SUN1O94901 812 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 EML2O95834 649 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CAPNS1P04632 268 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 ZSCAN5DPP0CG00 497 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CCKBRP32239 447 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 DRG2P55039 364 aaKnown RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 SARNPP82979 210 aaKnown RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 XIAPP98170 497 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 MSLNQ13421 630 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 NR1D2Q14995 579 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 NKAIN2Q5VXU1 208 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 B3GNT8Q7Z7M8 397 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 ZNF547Q8IVP9 402 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 BEND7Q8N7W2 519 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 PPHLN1Q8NEY8 458 aaKnown RBP13.44□□□□□ -0.26
CNOT1-206ENST00000564557 TMEM159Q96B96 161 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 SGF29Q96ES7 293 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 CDKN2AIPNLQ96HQ2 116 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 VPS37BQ9H9H4 285 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 PCDHGA8Q9Y5G5 932 aa13.44□□□□□ -0.26
CNOT1-206ENST00000564557 SPEGQ15772 3267 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 IGHV1OR21-1A0A087WYE8 117 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 TNFSF15O95150 251 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 AMD1P17707 334 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 XRCC1P18887 633 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 ADRA1DP25100 572 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 CD1CP29017 333 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 PPARGP37231 505 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 MLLT3P42568 568 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 CTSCP53634 463 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 PCBP4P57723 403 aaKnown RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 CACNG1Q06432 222 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 CCDC38Q502W7 563 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 ABRAXAS1Q6UWZ7 409 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 WASH2PQ6VEQ5 465 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 NCSTNQ92542 709 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 MS4A14Q96JA4 679 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 OSBPL9Q96SU4 736 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 NUDT22Q9BRQ3 303 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 AP1M1Q9BXS5 423 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 EPB41L1Q9H4G0 881 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 WASH6PQ9NQA3 447 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 EIF2B3Q9NR50 452 aaKnown RBP13.43□□□□□ -0.26
CNOT1-206ENST00000564557 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 BFARQ9NZS9 450 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 FAM8A1Q9UBU6 413 aa13.43□□□□□ -0.26
CNOT1-206ENST00000564557 ANAPC5Q9UJX4 755 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms