RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CPNE7Q9UBL6 633 aa19.55■□□□□ 0.72
CMTM3-207ENST00000564060 TRBV23OR9-2A0A075B6M9 112 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 AGAP14A8MT82 685 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 GPR39O43194 453 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 TLX3O43711 291 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 KRT37O76014 449 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 SUN1O94901 812 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 JMJD7P0C870 316 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 XRCC1P18887 633 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 CD1CP29017 333 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 HALP42357 657 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 TMPRSS15P98073 1019 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 XIAPP98170 497 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 TRA2AQ13595 282 aaKnown RBP eCLIP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 POU6F1Q14863 301 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 PHF19Q5T6S3 580 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 AGAP9Q5VTM2 703 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 TMEM220Q6QAJ8 160 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 ABRAXAS1Q6UWZ7 409 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 GSTA5Q7RTV2 222 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 C11orf96Q7Z7L8 435 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 SLITRK4Q8IW52 837 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 TAB3Q8N5C8 712 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 RASGEF1AQ8N9B8 481 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 OR4D9Q8NGE8 314 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 CCDC97Q96F63 343 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 PBKQ96KB5 322 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 UCK1Q9HA47 277 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 RDH14Q9HBH5 336 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 ASCL3Q9NQ33 180 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 POT1Q9NUX5 634 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 NLE1Q9NVX2 485 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-207ENST00000564060 SLC23A2Q9UGH3 650 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 KCTD3Q9Y597 815 aa19.54■□□□□ 0.72
CMTM3-207ENST00000564060 HGSO14964 777 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-207ENST00000564060 VIPP01282 170 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 MC4RP32245 332 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 CXCR5P32302 372 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 ABCG1P45844 678 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 SKIDA1Q1XH10 827 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 USP53Q70EK8 1073 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 RBM12BQ8IXT5 1001 aaKnown RBP19.53■□□□□ 0.72
CMTM3-207ENST00000564060 DNAJC1Q96KC8 554 aaKnown RBP19.53■□□□□ 0.72
CMTM3-207ENST00000564060 NAP1L3Q99457 506 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-207ENST00000564060 COPS8Q99627 209 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 LOXL2Q9Y4K0 774 aa19.53■□□□□ 0.72
CMTM3-207ENST00000564060 HEATR9A2RTY3 570 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 LILRA5A6NI73 299 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 PRR19A6NJB7 356 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 OR2AG2A6NM03 316 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 CDRT15L2A8MXV6 281 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 AP3B1O00203 1094 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 POP7O75817 140 aaKnown RBP19.52■□□□□ 0.72
CMTM3-207ENST00000564060 TNFSF15O95150 251 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 APRTP07741 180 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 TPH1P17752 444 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 CTSCP53634 463 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 LIMK2P53671 638 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 UBE2IP63279 158 aaKnown RBP19.52■□□□□ 0.72
CMTM3-207ENST00000564060 SEPT7Q16181 437 aaKnown RBP19.52■□□□□ 0.72
CMTM3-207ENST00000564060 FNBP1LQ5T0N5 605 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 TMEM71Q6P5X7 295 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 CLEC14AQ86T13 490 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 NXPE1Q8N323 547 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 OR52K1Q8NGK4 314 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 PRR11Q96HE9 360 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-207ENST00000564060 NUDT22Q9BRQ3 303 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 EIF2B3Q9NR50 452 aaKnown RBP19.52■□□□□ 0.72
CMTM3-207ENST00000564060 BPTFQ12830 3046 aa19.52■□□□□ 0.72
CMTM3-207ENST00000564060 A0A1W2PNU3 283 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 KIF5CO60282 957 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 RPL10P27635 214 aaKnown RBP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 BCL7AQ4VC05 210 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 ZRANB3Q5FWF4 1079 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 WDR74Q6RFH5 385 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 ZNF761Q86XN6 746 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 BEND7Q8N7W2 519 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.51■□□□□ 0.71
CMTM3-207ENST00000564060 CXorf40BQ96DE9 158 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 CDKN2AIPNLQ96HQ2 116 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 RANBP9Q96S59 729 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 SEMA6CQ9H3T2 930 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 VPS37BQ9H9H4 285 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 ZDHHC3Q9NYG2 299 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 PCDHGA7Q9Y5G6 932 aa19.51■□□□□ 0.71
CMTM3-207ENST00000564060 PKD1L2Q7Z442 2459 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 IGHV5-10-1A0A0J9YXX1 117 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 MGAT4DA6NG13 374 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 MROH6A6NGR9 719 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 THRAP10827 490 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 ETS1P14921 441 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 CA5AP35218 305 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 RPL22P35268 128 aaKnown RBP19.5■□□□□ 0.71
CMTM3-207ENST00000564060 BASP1P80723 227 aaKnown RBP19.5■□□□□ 0.71
CMTM3-207ENST00000564060 CACNG1Q06432 222 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 NKAIN2Q5VXU1 208 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 TMEM26Q6ZUK4 368 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 DET1Q7L5Y6 550 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 NLRP9Q7RTR0 991 aa19.5■□□□□ 0.71
CMTM3-207ENST00000564060 TMPRSS9Q7Z410 1059 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms