RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MARCKSL1P49006 195 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 PPM1FP49593 454 aaPredicted RBP16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 ABHD18Q0P651 414 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 NOMO1Q15155 1222 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 LDLRAP1Q5SW96 308 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 TIPARPQ7Z3E1 657 aaKnown RBP16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 EFHD1Q9BUP0 239 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 APMAPQ9HDC9 416 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 LUC7LQ9NQ29 371 aaKnown RBP16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 SMOXQ9NWM0 555 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 DNAJC16Q9Y2G8 782 aa16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 ASH1LQ9NR48 2969 aaKnown RBP16.92■□□□□ 0.3
VPS9D1-203ENST00000563798 GAPDHSO14556 408 aaPredicted RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 POLR1CO15160 346 aaPredicted RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 FAM87AP0C7U9 286 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 FECHP22830 423 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 GFERP55789 205 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 ITGA9Q13797 1035 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 GTF2H3Q13889 308 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 CLCA4Q14CN2 919 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 LLGL1Q15334 1064 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 SPA17Q15506 151 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 CHRNA6Q15825 494 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 PLA2G4EQ3MJ16 856 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 CRTC2Q53ET0 693 aaPredicted RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 PRSS42Q7Z5A4 293 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 TRIM48Q8IWZ4 208 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 KRT35Q92764 455 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 CATSPER2Q96P56 530 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 CTRCQ99895 268 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 TRIM5Q9C035 493 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 ZCCHC2Q9C0B9 1178 aaKnown RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 ZNF768Q9H5H4 540 aaKnown RBP16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 SEMA5BQ9P283 1151 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 TUBD1Q9UJT1 453 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 BOD1L1Q8NFC6 3051 aa16.91■□□□□ 0.3
VPS9D1-203ENST00000563798 TLN1Q9Y490 2541 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GOLGA6L3A6NEY3 463 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 OR52A4PA6NMU1 304 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 ZNF891A8MT65 544 aaPredicted RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 SLC28A2O43868 658 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 STK17BO94768 372 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 RPL10P27635 214 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 CTNNA1P35221 906 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 PTPN7P35236 360 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 CYLC1P35663 651 aaPredicted RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 CAPZBP47756 277 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 NFATC3Q12968 1075 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GPR18Q14330 331 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 IL11RAQ14626 422 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 BORAQ6PGQ7 559 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 RANBP10Q6VN20 620 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 AMZ2Q86W34 360 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 TRAPPC5Q8IUR0 188 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 CCDC50Q8IVM0 306 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 SLC25A41Q8N5S1 370 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 RASGEF1AQ8N9B8 481 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 IPMKQ8NFU5 416 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GDAP1Q8TB36 358 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 KLHL6Q8WZ60 621 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 KIAA1143Q96AT1 154 aaPredicted RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 ZNF514Q96K75 400 aaPredicted RBP16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 TTC25Q96NG3 672 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 C19orf43Q9BQ61 176 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GORASP1Q9BQQ3 440 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 GBA3Q9H227 469 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 KLHL3Q9UH77 587 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 RSPH14Q9UHP6 348 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 PKP3Q9Y446 797 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 PCDHA3Q9Y5H8 950 aa16.9■□□□□ 0.3
VPS9D1-203ENST00000563798 LOC101059948A0A1B0GTJ6 334 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 KLHL33A6NCF5 533 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A9O60656 530 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 POP7O75817 140 aaKnown RBP16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 ANXA9O76027 345 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 ZIC2O95409 532 aaPredicted RBP16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 TYRP1P17643 537 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 AMD1P17707 334 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A6P19224 532 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A1P22309 533 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A4P22310 534 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 RBL1P28749 1068 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 CA5AP35218 305 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 ADRA1AP35348 466 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 CTSCP53634 463 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 GEMP55040 296 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 GPRC6AQ5T6X5 926 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 FAM151BQ6UXP7 276 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 DAAM2Q86T65 1068 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 ESX1Q8N693 406 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 BLOC1S5Q8TDH9 187 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 RSC1A1Q92681 617 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms