RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CARD16Q5EG05 197 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 OGFOD2Q6N063 350 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 MACC1Q6ZN28 852 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 USP45Q70EL2 814 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 NXPE1Q8N323 547 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 GDPD5Q8WTR4 605 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 NAT14Q8WUY8 206 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 ESAMQ96AP7 390 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SCRN2Q96FV2 425 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 ZNF382Q96SR6 550 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 HTATIP2Q9BUP3 242 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 CPEB1Q9BZB8 566 aaKnown RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 PSMD13Q9UNM6 376 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 NEDD8-MDP1E9PL57 170 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 ACOT8O14734 319 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 GIPC1O14908 333 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 CASQ2O14958 399 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 SLC25A14O95258 325 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 TRIM16O95361 564 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 CHEK2O96017 543 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 S100BP04271 92 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 PABPC1P11940 636 aaKnown RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 MSX2P35548 267 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 BMPR1AP36894 532 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 CCNHP51946 323 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 PCBP2Q15366 365 aaKnown RBP eCLIP9.69□□□□□ -0.865e-7■■□□□ 14
SMG1-205ENST00000561947 GSTA3Q16772 222 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 XKR7Q5GH72 579 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 LRRC66Q68CR7 880 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 IRGCQ6NXR0 463 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 C8orf82Q6P1X6 216 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 ZFP1Q6P2D0 407 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SPATA19Q7Z5L4 167 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 MYO1HQ8N1T3 1032 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 CLDN19Q8N6F1 224 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 GPR26Q8NDV2 337 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 BHLHE22Q8NFJ8 381 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 POF1BQ8WVV4 589 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 MCCC1Q96RQ3 725 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 RAD9AQ99638 391 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 VCX3BQ9H321 246 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 ZDHHC6Q9H6R6 413 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SDR39U1Q9NRG7 319 aaPredicted RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 TDP1Q9NUW8 608 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SUCOQ9UBS9 1254 aaKnown RBP9.69□□□□□ -0.86
SMG1-205ENST00000561947 CROTQ9UKG9 612 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 SLC4A7Q9Y6M7 1214 aa9.69□□□□□ -0.86
SMG1-205ENST00000561947 KIAA0100Q14667 2235 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 MKI67P46013 3256 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 AGAP14A8MT82 685 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 NR5A2O00482 541 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 TRIM24O15164 1050 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 RAD51BO15315 384 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 FFAR2O15552 330 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 MATN4O95460 622 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 POP4O95707 220 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 RHOP08100 348 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 IDO1P14902 403 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 DGKAP23743 735 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 NME5P56597 212 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 SEMG2Q02383 582 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 SLC5A9Q2M3M2 681 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 GPRC6AQ5T6X5 926 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 LPCAT4Q643R3 524 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 DPY19L3Q6ZPD9 716 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 RTL10Q7L3V2 364 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 PDPRQ8NCN5 879 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 DLG3Q92796 817 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 IRF7Q92985 503 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ROPN1LQ96C74 230 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ZNF641Q96N77 438 aaPredicted RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 FAM126AQ9BYI3 521 aaPredicted RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 SPAG4Q9NPE6 437 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 PFDN4Q9NQP4 134 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 TNPO3Q9Y5L0 923 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 OR4F21O95013 312 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 MRPL19P49406 292 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 MRPS22P82650 360 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 KLC1Q07866 573 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ZNF77Q15935 545 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 PQLC1Q8N2U9 271 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ZNF557Q8N988 423 aaPredicted RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 PCYOX1LQ8NBM8 494 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ASB9Q96DX5 294 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 ASIC4Q96FT7 647 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 NOL11Q9H8H0 719 aaKnown RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 TLR9Q9NR96 1032 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 SPHK2Q9NRA0 654 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 C6orf203Q9P0P8 240 aaPredicted RBP9.68□□□□□ -0.86
SMG1-205ENST00000561947 SLCO3A1Q9UIG8 710 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 NDUFAF1Q9Y375 327 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 OARD1Q9Y530 152 aa9.68□□□□□ -0.86
SMG1-205ENST00000561947 GPR45Q9Y5Y3 372 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms