RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 RBBP7Q16576 425 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 FGD3Q5JSP0 725 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 FAM26DQ5JW98 314 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 PPP4R4Q6NUP7 873 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 SCIMPQ6UWF3 145 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 CBR4Q8N4T8 237 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 DNAJB14Q8TBM8 379 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 TRIB3Q96RU7 358 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 MGME1Q9BQP7 344 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEIL1-202ENST00000561643 CRISPLD1Q9H336 500 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 RIMKLBQ9ULI2 386 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 CORINQ9Y5Q5 1042 aa10.87□□□□□ -0.67
NEIL1-202ENST00000561643 MTMR11A4FU01 709 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 OR6C75A6NL08 312 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 C2orf81A6NN90 581 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 CKBP12277 381 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 HSD17B1P14061 328 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 SOX11P35716 441 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 RGRP47804 291 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 AGTR2P50052 363 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ESRRGP62508 458 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ITGADQ13349 1161 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 DEPDC1Q5TB30 811 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 BLOC1S3Q6QNY0 202 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ABI1Q8IZP0 508 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 FAM47BQ8NA70 645 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 VPS33AQ96AX1 596 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 SMIM14Q96QK8 99 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 GPR62Q9BZJ7 368 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 OLAHQ9NV23 265 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 MED16Q9Y2X0 877 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ZFP37Q9Y6Q3 630 aaPredicted RBP10.86□□□□□ -0.67
NEIL1-202ENST00000561643 RNF103-CHMP3A0A140T963 221 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 AOC2O75106 756 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 FASP25445 335 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 PRDX3P30048 256 aaKnown RBP10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
NEIL1-202ENST00000561643 CDKN1CP49918 316 aaPredicted RBP10.86□□□□□ -0.67
NEIL1-202ENST00000561643 BMXP51813 675 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 DUSP4Q13115 394 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 GPR107Q5VW38 600 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 FAM117BQ6P1L5 589 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 LPCAT1Q8NF37 534 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 FUBP1Q96AE4 644 aaKnown RBP10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ESAMQ96AP7 390 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 HGH1Q9BTY7 390 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ANKRD60Q9BZ19 345 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 MAGEH1Q9H213 219 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 ACTR3BQ9P1U1 418 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
NEIL1-202ENST00000561643 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 ENPP3O14638 875 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 ARPC2O15144 300 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 INPP4BO15327 924 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 INSIG1O15503 277 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 KDM1AO60341 852 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 SNX2O60749 519 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 VPS26AO75436 327 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 CYBBP04839 570 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 RPS17P08708 135 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 PABPC1P11940 636 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 SLC6A4P31645 630 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 RPS24P62847 133 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 YBX1P67809 324 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 CLPPQ16740 277 aaPredicted RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 FUT11Q495W5 492 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 SETMARQ53H47 684 aaPredicted RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 IRAK1BP1Q5VVH5 260 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 LCN8Q6JVE9 175 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 CAMK1DQ8IU85 385 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 FIBCD1Q8N539 461 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 NKAPQ8N5F7 415 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 EFHBQ8N7U6 833 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 PCSK9Q8NBP7 692 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 MDGA1Q8NFP4 955 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 PSKH2Q96QS6 385 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 NAA50Q9GZZ1 169 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 DUS2Q9NX74 493 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 GALPQ9UBC7 116 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 TRMT6Q9UJA5 497 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 GPR45Q9Y5Y3 372 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 A0A1W2PP18 115 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 ACSL4O60488 711 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 NIPSNAP2O75323 286 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 MTHFD1P11586 935 aaKnown RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 APLP1P51693 650 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 NEK2P51955 445 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 TAF1AQ15573 450 aaPredicted RBP10.85□□□□□ -0.67
NEIL1-202ENST00000561643 CYP51A1Q16850 503 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 RGS21Q2M5E4 152 aa10.85□□□□□ -0.67
NEIL1-202ENST00000561643 RABL3Q5HYI8 236 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms