RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ADPRHP54922 357 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 UCP2P55851 309 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 NXPH1P58417 271 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 WDR5P61964 334 aaKnown RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 IRX3P78415 501 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 SLC25A3Q00325 362 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 FOLH1Q04609 750 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SPAG1Q07617 926 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PLA2G7Q13093 441 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PDZK1IP1Q13113 114 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MMRN1Q13201 1228 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 NEDD9Q14511 834 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SQLEQ14534 574 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 EFTUD2Q15029 972 aaKnown RBP eCLIP2.02□□□□□ -2.095e-7■■■■□ 26.2
RTF1-207ENST00000561076 SHBQ15464 509 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ACKR1Q16570 336 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PDK4Q16654 411 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ME3Q16798 604 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MEP1AQ16819 746 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 HADHQ16836 314 aaKnown RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 SOWAHAQ2M3V2 549 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SLC36A3Q495N2 470 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 NADK2Q4G0N4 442 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CCDC152Q4G0S7 254 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CXorf66Q5JRM2 361 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 TSTD2Q5T7W7 516 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ZDHHC20Q5W0Z9 365 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SIGIRRQ6IA17 410 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 NCAPH2Q6IBW4 605 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD16Q6P6B7 361 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ZCCHC12Q6PEW1 402 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 TMEM65Q6PI78 240 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 BRAT1Q6PJG6 821 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 KIRREL2Q6UWL6 708 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MPZL3Q6UWV2 235 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 VSTM1Q6UX27 236 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ZYG11AQ6WRX3 759 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 KYAT3Q6YP21 454 aaKnown RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 KIF6Q6ZMV9 814 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 Q6ZNB5 142 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 TMEM182Q6ZP80 229 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 CYB5R4Q7L1T6 521 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PRSS42Q7Z5A4 293 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ADGRE4PQ86SQ3 457 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CUZD1Q86UP6 607 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SLC51AQ86UW1 340 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 HAPLN4Q86UW8 402 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 DTX2Q86UW9 622 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 GPR180Q86V85 440 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 WDR5BQ86VZ2 330 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 AMIGO1Q86WK6 493 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CCDC25Q86WR0 208 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 WFDC3Q8IUB2 231 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 TMEM126BQ8IUX1 230 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SIAH3Q8IW03 269 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MAPKAPK5Q8IW41 473 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 FAM219AQ8IW50 185 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PHC2Q8IXK0 858 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 LAS2Q8IYD9 372 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ELOA2Q8IYF1 753 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 ABI1Q8IZP0 508 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 TTC5Q8N0Z6 440 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 D2HGDHQ8N465 521 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 NECAB1Q8N987 351 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 EIF1ADQ8N9N8 165 aaKnown RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 FAM47BQ8NA70 645 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 TMEM185AQ8NFB2 350 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 GJC3Q8NFK1 279 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 OR52M1Q8NGK5 317 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 AKR7LQ8NHP1 331 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 B4GALNT2Q8NHY0 566 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 HUS1BQ8NHY5 278 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SLC22A8Q8TCC7 542 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MIPOL1Q8TD10 442 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ACTRT2Q8TDY3 377 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SLC26A7Q8TE54 656 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PPP4R1Q8TF05 950 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ZNF483Q8TF39 744 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 FAR1Q8WVX9 515 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CKAP2Q8WWK9 683 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SOCS4Q8WXH5 440 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 FIG4Q92562 907 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 PIGKQ92643 395 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 DPF1Q92782 380 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 BCL2L2Q92843 193 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 RIT1Q92963 219 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 FBXO32Q969P5 355 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MOB3AQ96BX8 217 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 RNF183Q96D59 192 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SHISA4Q96DD7 197 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 CCDC51Q96ER9 411 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ALG14Q96F25 216 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 OTUB1Q96FW1 271 aaPredicted RBP2.02□□□□□ -2.09
RTF1-207ENST00000561076 MAGED4Q96JG8 741 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 QRFPRQ96P65 431 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 RAD9AQ99638 391 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 SYT3Q9BQG1 590 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 ZPBPQ9BS86 351 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 FICDQ9BVA6 458 aa2.02□□□□□ -2.09
RTF1-207ENST00000561076 MOV10L1Q9BXT6 1211 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms