RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CBSP35520 551 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ETV3P41162 512 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 IL12RB1P42701 662 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ELP6Q0PNE2 266 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ENPP2Q13822 863 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TGFBIQ15582 683 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 PPP1R3AQ16821 1122 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 LSM12Q3MHD2 195 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 ANKS6Q68DC2 871 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SBSNQ6UWP8 590 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 RPS27LQ71UM5 84 aaKnown RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 CYP2U1Q7Z449 544 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SCAMP4Q969E2 229 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 PPP1R16AQ96I34 528 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 MSLNLQ96KJ4 702 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 COQ10AQ96MF6 247 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
SNX1-211ENST00000560829 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 KCTD5Q9NXV2 234 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TAGLN3Q9UI15 199 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 CD84Q9UIB8 345 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 TRAF6Q9Y4K3 522 aa12.74□□□□□ -0.37
SNX1-211ENST00000560829 SLC22A2O15244 555 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 CDK14O94921 469 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 AP2A2O94973 939 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 ELFN1P0C7U0 828 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 ATP1B2P14415 290 aaPredicted RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 EPHA3P29320 983 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 EEF1DP29692 281 aaKnown RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 CREB5Q02930 508 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 LCP2Q13094 533 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 GBX1Q14549 363 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 GRIN2CQ14957 1233 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 ZNF284Q2VY69 593 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 POM121L1PQ3SYA9 428 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 ACSBG2Q5FVE4 666 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 NUDT18Q6ZVK8 323 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 ZNF483Q8TF39 744 aaPredicted RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 SUSD6Q92537 303 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 UTP4Q969X6 686 aaKnown RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 RAB3IPQ96QF0 476 aaPredicted RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 RIOK2Q9BVS4 552 aaKnown RBP12.73□□□□□ -0.37
SNX1-211ENST00000560829 MEAF6Q9HAF1 191 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
SNX1-211ENST00000560829 LRRC14BA6NHZ5 514 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CFAP99D6REC4 459 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 SDHDO14521 159 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 WNT9AO14904 365 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 SNX2O60749 519 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 KRT16P08779 473 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ENO3P13929 434 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 ADRB3P13945 408 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ITGB6P18564 788 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 LTBRP36941 435 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 METAP1P53582 386 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CDH13P55290 713 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ELF3P78545 371 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 CLCQ05315 142 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 BTKQ06187 659 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PDCD2Q16342 344 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 UGT3A2Q3SY77 523 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 MTSS1LQ765P7 747 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ZNF765Q7L2R6 523 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PDPRQ8NCN5 879 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ACTRT2Q8TDY3 377 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 NAT14Q8WUY8 206 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 DTD2Q96FN9 168 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 RPP25Q9BUL9 199 aaKnown RBP12.72□□□□□ -0.37
SNX1-211ENST00000560829 TBC1D10AQ9BXI6 508 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ABCG8Q9H221 673 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 PRSS16Q9NQE7 514 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 OARD1Q9Y530 152 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 KIAA1549LQ6ZVL6 1849 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 GOLGA8QA0A0J9YX86 632 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 FADS2P1A8MWK0 482 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 E9PBE3 544 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 C1QTNF3-AMACRE9PGA6 284 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 QSOX1O00391 747 aa12.72□□□□□ -0.37
SNX1-211ENST00000560829 NPC1O15118 1278 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms