RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 DKK3Q9UBP4 350 aa20.37■□□□□ 0.85
PSEN1-225ENST00000560005 KCNK1O00180 336 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 SASH3O75995 380 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 TMCC1O94876 653 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 JCHAINP01591 159 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 APRTP07741 180 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 MLNP12872 115 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 MAGEA4P43358 317 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 B4GALNT1Q00973 533 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 ELP6Q0PNE2 266 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 ZNF354CQ86Y25 554 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 TSEN2Q8NCE0 465 aaKnown RBP20.36■□□□□ 0.85
PSEN1-225ENST00000560005 LRRC39Q96DD0 335 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 TAAR9Q96RI9 348 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 CCDC77Q9BR77 488 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 NOL6Q9H6R4 1146 aaKnown RBP20.36■□□□□ 0.85
PSEN1-225ENST00000560005 FGF22Q9HCT0 170 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 MRPL40Q9NQ50 206 aaKnown RBP20.36■□□□□ 0.85
PSEN1-225ENST00000560005 RSPH14Q9UHP6 348 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 PLAAQ9Y263 795 aa20.36■□□□□ 0.85
PSEN1-225ENST00000560005 AAR2Q9Y312 384 aaKnown RBP20.36■□□□□ 0.85
PSEN1-225ENST00000560005 TMEM202A6NGA9 273 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 E7ESA3 106 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 B4GAT1O43505 415 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 ANXA9O76027 345 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 METTL18O95568 372 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 TTC4O95801 387 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 IGSF6O95976 241 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 NUDT17P0C025 328 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 FGF3P11487 239 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-225ENST00000560005 UGT1A3P35503 534 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 OR1D5P58170 312 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 MTM1Q13496 603 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 TP53INP2Q8IXH6 220 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 PLA2G15Q8NCC3 412 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 CCL4L1Q8NHW4 92 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 C9orf43Q8TAL5 461 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-225ENST00000560005 GPBAR1Q8TDU6 330 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 HMCESQ96FZ2 354 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 NUDT22Q9BRQ3 303 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 TMEM168Q9H0V1 697 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 GBA3Q9H227 469 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 SAYSD1Q9NPB0 183 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 PCDHGA3Q9Y5H0 932 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 ANKRD36A6QL64 1941 aa20.35■□□□□ 0.85
PSEN1-225ENST00000560005 ICE1Q9Y2F5 2266 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 GOLGA6L10A6NI86 522 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 HGSO14964 777 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-225ENST00000560005 INSIG1O15503 277 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 KDELR3O43731 214 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 PIGNO95427 931 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 LIG3P49916 1009 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 PDIA2Q13087 525 aaKnown RBP20.34■□□□□ 0.85
PSEN1-225ENST00000560005 RFTN1Q14699 578 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-225ENST00000560005 MARC1Q5VT66 337 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 LINC00523Q86TU6 105 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 OR56A4Q8NGH8 313 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 CCDC74BQ96LY2 380 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 CATSPER2Q96P56 530 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 CDH19Q9H159 772 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 PCDH12Q9NPG4 1184 aa20.34■□□□□ 0.85
PSEN1-225ENST00000560005 RBM22Q9NW64 420 aaKnown RBP eCLIP20.34■□□□□ 0.85
PSEN1-225ENST00000560005 ARHGEF17Q96PE2 2063 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 IGHV5-10-1A0A0J9YXX1 117 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 ZNF891A8MT65 544 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 CACNB4O00305 520 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 RIPK2O43353 540 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 PRAMEF11O60813 436 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 SPAG6O75602 509 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 ABHD2P08910 425 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 ALDH4A1P30038 563 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 PHBP35232 272 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 SUOXP51687 545 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 MAZP56270 477 aaKnown RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 RHOAP61586 193 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 IFFO1Q0D2I5 559 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 KCTD19Q17RG1 926 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 ANKRD22Q5VYY1 191 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 HIST2H2BCQ6DN03 193 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 CACNA2D3Q8IZS8 1091 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 PYROXD1Q8WU10 500 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 LRRN4Q8WUT4 740 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 FUBP1Q96AE4 644 aaKnown RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 EXOC2Q96KP1 924 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 AGAP3Q96P47 875 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 FCRL5Q96RD9 977 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 CDC42EP4Q9H3Q1 356 aaKnown RBP20.33■□□□□ 0.85
PSEN1-225ENST00000560005 LRRC4CQ9HCJ2 640 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 OGFRQ9NZT2 677 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 B3GALT1Q9Y5Z6 326 aa20.33■□□□□ 0.85
PSEN1-225ENST00000560005 TMEM63AO94886 807 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 GSTA2P09210 222 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 CES1P23141 567 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 PSMB4P28070 264 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 GEMP55040 296 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 KIAA1024LP59773 190 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 ZBTB17Q13105 803 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 AGERQ15109 404 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 UAP1Q16222 522 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-225ENST00000560005 UGP2Q16851 508 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms