RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 POT1Q9NUX5 634 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 OGFRQ9NZT2 677 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 DNAJC16Q9Y2G8 782 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 AAR2Q9Y312 384 aaKnown RBP16.74■□□□□ 0.27
LRRC28-210ENST00000558879 PKP3Q9Y446 797 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 ARL5AQ9Y689 179 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 CAPN6Q9Y6Q1 641 aa16.74■□□□□ 0.27
LRRC28-210ENST00000558879 MIF4GDA9UHW6 222 aaKnown RBP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 BUD23O43709 281 aaKnown RBP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 ZNF189O75820 626 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 C9P02748 559 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 CSTF2P33240 577 aaKnown RBP eCLIP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 CTSCP53634 463 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 GTF2H3Q13889 308 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 TAF1AQ15573 450 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 GPRC6AQ5T6X5 926 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 TMEM164Q5U3C3 297 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 TMEM26Q6ZUK4 368 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 TRAPPC5Q8IUR0 188 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 RASGEF1AQ8N9B8 481 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 CCDC112Q8NEF3 446 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 CCDC110Q8TBZ0 833 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 ART4Q93070 314 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 C19orf43Q9BQ61 176 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 DESI2Q9BSY9 194 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 OCIAD1Q9NX40 245 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 AMFRQ9UKV5 643 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-210ENST00000558879 B3GALT1Q9Y5Z6 326 aa16.73■□□□□ 0.27
LRRC28-210ENST00000558879 CFAP46Q8IYW2 2715 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 EIF4E1BA6NMX2 242 aaKnown RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 AGAP14A8MT82 685 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 STMND1H3BQB6 276 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A9O60656 530 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 KCNJ13O60928 360 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 STK10O94804 968 aaKnown RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 PRAMEF1O95521 474 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 ANKRD34CP0C6C1 535 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A6P19224 532 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 LPOP22079 712 aaPredicted RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A1P22309 533 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A4P22310 534 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A3P35503 534 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 CETN2P41208 172 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 RAB15P59190 212 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 KIF5AQ12840 1032 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 PTPRCAPQ14761 206 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 SEPT7Q16181 437 aaKnown RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 KIAA1614Q5VZ46 1190 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 DENND5AQ6IQ26 1287 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 DARS2Q6PI48 645 aaKnown RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 PEX26Q7Z412 305 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 SYCE1Q8N0S2 351 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 GDAP1Q8TB36 358 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 NCSTNQ92542 709 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 HES6Q96HZ4 224 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 PPP1R2P1Q96PQ5 205 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A7Q9HAW7 530 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A10Q9HAW8 530 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 UGT1A8Q9HAW9 530 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 ARNT2Q9HBZ2 717 aa16.72■□□□□ 0.27
LRRC28-210ENST00000558879 SIDT1Q9NXL6 827 aaKnown RBP16.72■□□□□ 0.27
LRRC28-210ENST00000558879 C5orf60A6NFR6 353 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 EFCAB7A8K855 629 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 PDZK1P1A8MUH7 402 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 STX7O15400 261 aaKnown RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 SNRNP200O75643 2136 aaKnown RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 VIPP01282 170 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 VCLP18206 1134 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 IDSP22304 550 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 RPL10P27635 214 aaKnown RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 GFERP55789 205 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 XIAPP98170 497 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 KCTD11Q693B1 232 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 FAM129CQ86XR2 697 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 RBM12BQ8IXT5 1001 aaKnown RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 TXLNBQ8N3L3 684 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 UBL4BQ8N7F7 174 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 TTC13Q8NBP0 860 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 OR4K2Q8NGD2 314 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 APOL2Q9BQE5 337 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 WDR37Q9Y2I8 494 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 PCDHGA4Q9Y5G9 962 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 DNMT3AQ9Y6K1 912 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-210ENST00000558879 SLC30A1Q9Y6M5 507 aa16.71■□□□□ 0.27
LRRC28-210ENST00000558879 OR52A4PA6NMU1 304 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 C2orf81A6NN90 581 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 FTCDO95954 541 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 WT1P19544 449 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-210ENST00000558879 MAPK9P45984 424 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 CAPZBP47756 277 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 DRG2P55039 364 aaKnown RBP16.7■□□□□ 0.26
LRRC28-210ENST00000558879 MC2RQ01718 297 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 PRPSAP1Q14558 356 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 CLCA4Q14CN2 919 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 MANEAQ5SRI9 462 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 ANKS6Q68DC2 871 aa16.7■□□□□ 0.26
LRRC28-210ENST00000558879 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms