RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PAHP00439 452 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LTKP29376 864 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LCN1P31025 176 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TKFCQ3LXA3 575 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR7G2Q8NG99 324 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TESCQ96BS2 214 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CLPBQ9H078 707 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SNX15Q9NRS6 342 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 INTS7Q9NVH2 962 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HMGXB4Q9UGU5 601 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NT5C1B-RDH14C9J2C7 533 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 IRF8Q02556 426 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NANOGP8Q6NSW7 305 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LRRN1Q6UXK5 716 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PTERQ96BW5 349 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 C11orf24Q96F05 449 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 THAP7Q9BT49 309 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DLGAP4Q9Y2H0 992 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LGALS8O00214 317 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CXCR6O00574 342 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NFYAP23511 347 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SKP1P63208 163 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 C4orf46Q504U0 113 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 GDPD3Q7L5L3 318 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NKAPQ8N5F7 415 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FCRL4Q96PJ5 515 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR12D3Q9UGF7 316 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 A0A0J9YYE9 177 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 USP17L7P0C7H9 530 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FAM205BPQ63HN1 556 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF304Q9HCX3 659 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 KCNQ5Q9NR82 932 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PAK1IP1Q9NWT1 392 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM9Q9P0T7 183 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SCAMP1O15126 338 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 OR6A2O95222 327 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CST3P01034 146 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 OMPP47874 163 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 USP51Q70EK9 711 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 ZSCAN1Q8NBB4 408 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 HTATIP2Q9BUP3 242 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 RIOK2Q9BVS4 552 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 METTL8Q9H825 291 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 A0A1W2PQL4 384 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 TEX46H3BTG2 121 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 GIMD1P0DJR0 217 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 COL6A1P12109 1028 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 GBX2P52951 348 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 DAG1Q14118 895 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM119Q4V9L6 283 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 SNX29P2Q8IUI4 249 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 AQP12AQ8IXF9 295 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 ARL15Q9NXU5 204 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 UBQLN2Q9UHD9 624 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 GM2AP17900 193 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 PTPN1P18031 435 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CDK5R2Q13319 367 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CLCA4Q14CN2 919 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CPSF6Q16630 551 aaKnown RBP eCLIP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 LDB1Q86U70 411 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 OR2L2Q8NH16 312 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 DCAKDQ8WVC6 231 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 PRDM12Q9H4Q4 367 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 SNX6Q9UNH7 406 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM98Q9Y2Y6 226 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHB12Q9Y5F1 795 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 EFNA1P20827 205 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 FASTKD3Q14CZ7 662 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 RNF151Q2KHN1 245 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 DESI1Q6ICB0 168 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 XRRA1Q6P2D8 792 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 NIM1KQ8IY84 436 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CELF1Q92879 486 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 KCTD7Q96MP8 289 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 ADAM7Q9H2U9 754 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 OXSMQ9NWU1 459 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 MITFO75030 526 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 IGFBP5P24593 272 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 SLC3A1Q07837 685 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM185AQ8NFB2 350 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 FCAMRQ8WWV6 532 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 C3orf49Q96BT1 292 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 KREMEN1Q96MU8 473 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 CYP2S1Q96SQ9 504 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 MUC3BQ9H195 1237 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 NANOGQ9H9S0 305 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 GMPR2Q9P2T1 348 aaKnown RBP3.65□□□□□ -1.82
ATXN3-248ENST00000558190 NLKQ9UBE8 527 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 ENOPH1Q9UHY7 261 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 COL28A1Q2UY09 1125 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 P2RY11Q96G91 374 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 PLA2G12BQ9BX93 195 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 LGR4Q9BXB1 951 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 C2orf40Q9H1Z8 148 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 PIK3CBP42338 1070 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 MAN2A2P49641 1150 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 NDST2P52849 883 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 RHBDL3P58872 404 aa3.65□□□□□ -1.82
ATXN3-248ENST00000558190 AMHR2Q16671 573 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms