RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 LRRC61Q9BV99 259 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 CLPBQ9H078 707 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 TMEM9BQ9NQ34 198 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 FBXO6Q9NRD1 293 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 TM7SF3Q9NS93 570 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 ZFATQ9P243 1243 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 SLC17A6Q9P2U8 582 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 PRSS21Q9Y6M0 314 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 TMEM131Q92545 1883 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 TCRBV9S1A1TA0A576 114 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 KMOO15229 486 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 DGKAP23743 735 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 EPHA8P29322 1005 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 MPP1Q00013 466 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 TEDDM1Q5T9Z0 273 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 RIF1Q5UIP0 2472 aaKnown RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 ZNF547Q8IVP9 402 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 BEND7Q8N7W2 519 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 ZNF548Q8NEK5 533 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.97■□□□□ 0.956e-13■■■■■ 112.3
CASC4-204ENST00000557945 INTS10Q9NVR2 710 aaKnown RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 UCKL1Q9NWZ5 548 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 TRNAU1APQ9NX07 287 aaKnown RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 VPS9D1Q9Y2B5 631 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 PLEKHM1Q9Y4G2 1056 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 CDX4O14627 284 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 PRMT5O14744 637 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 AQP9O43315 295 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 AP2A2O94973 939 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 ACSL3O95573 720 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 S1PR4O95977 384 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 CELA2BP08218 269 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 PBLDP30039 288 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 STX2P32856 288 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 PHBP35232 272 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 PMS2P54278 862 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 EIF3BP55884 814 aaKnown RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 ILF3Q12906 894 aaKnown RBP eCLIP20.96■□□□□ 0.95
CASC4-204ENST00000557945 ELOCQ15369 112 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 INSCQ1MX18 579 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 UAP1L1Q3KQV9 507 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 BCL7AQ4VC05 210 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 GATAD2AQ86YP4 633 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 CNTN4Q8IWV2 1026 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 FSTL5Q8N475 847 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 C2CD4AQ8NCU7 369 aaPredicted RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 FBF1Q8TES7 1133 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 LPGAT1Q92604 370 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 CDKL2Q92772 493 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 DNAAF2Q9NVR5 837 aaKnown RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 GPR34Q9UPC5 381 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 DOLKQ9UPQ8 538 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 CRYL1Q9Y2S2 319 aa20.96■□□□□ 0.95
CASC4-204ENST00000557945 TDRD6O60522 2096 aaKnown RBP20.96■□□□□ 0.95
CASC4-204ENST00000557945 F8W8V4 182 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 SGTAO43765 313 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 GDF9O60383 454 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 POP7O75817 140 aaKnown RBP20.95■□□□□ 0.94
CASC4-204ENST00000557945 FMO4P31512 558 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 CTBSQ01459 385 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 ZNF789Q5FWF6 425 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 UBAP2Q5T6F2 1119 aaKnown RBP20.95■□□□□ 0.94
CASC4-204ENST00000557945 PTRHD1Q6GMV3 140 aaKnown RBP20.95■□□□□ 0.94
CASC4-204ENST00000557945 KIAA0408Q6ZU52 694 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 TRMT10CQ7L0Y3 403 aaKnown RBP20.95■□□□□ 0.94
CASC4-204ENST00000557945 TAF8Q7Z7C8 310 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 CCL4L1Q8NHW4 92 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 SCG3Q8WXD2 468 aaKnown RBP20.95■□□□□ 0.94
CASC4-204ENST00000557945 GSDMCQ9BYG8 508 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 SLC23A2Q9UGH3 650 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 KCNK6Q9Y257 313 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 DNAJC16Q9Y2G8 782 aa20.95■□□□□ 0.94
CASC4-204ENST00000557945 CABIN1Q9Y6J0 2220 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 C4orf47A7E2U8 309 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 QSOX1O00391 747 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 PIAS1O75925 651 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 OR56A5P0C7T3 313 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 AK4P27144 223 aaPredicted RBP20.94■□□□□ 0.94
CASC4-204ENST00000557945 PRLHRP49683 370 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 LRP8Q14114 963 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 ZNF449Q6P9G9 518 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 SLC30A9Q6PML9 568 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 CYS1Q717R9 158 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 AMZ2Q86W34 360 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 LRRC6Q86X45 466 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 CTAGE3PQ8IX95 158 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 KIAA2013Q8IYS2 634 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 SAP25Q8TEE9 199 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 SMYD2Q9NRG4 433 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 KLC4Q9NSK0 619 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 FAM8A1Q9UBU6 413 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 GNPTGQ9UJJ9 305 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 LRP4O75096 1905 aa20.94■□□□□ 0.94
CASC4-204ENST00000557945 NEMP2A6NFY4 417 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 FFAR2O15552 330 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 HAUS5O94927 633 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 FTH1P02794 183 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 TUBBP07437 444 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 ANXA6P08133 673 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms