RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 DPPA4Q7L190 304 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 FAM214BQ7L5A3 538 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 FSTL5Q8N475 847 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ATPAF2Q8N5M1 289 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 TEX26Q8N6G2 289 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 KCTD6Q8NC69 237 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF564Q8TBZ8 553 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 FBLIM1Q8WUP2 373 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 CTNNBL1Q8WYA6 563 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 FATE1Q969F0 183 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 KCNJ15Q99712 375 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 MGME1Q9BQP7 344 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ABCG4Q9H172 646 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 HAUS2Q9NVX0 235 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 CTTNBP2NLQ9P2B4 639 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 LRRK1Q38SD2 2015 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 A0A087WV48 116 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 LY6G6EA0A0G2JKS1 128 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 F8W735 103 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 YY2O15391 372 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 AKR1B10O60218 316 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 GCATO75600 419 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 RECQL5O94762 991 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TNFP01375 233 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 AMY2AP04746 511 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ANXA6P08133 673 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 GSTM1P09488 218 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ALPIP09923 528 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TMEM253P0C7T8 217 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ELFN1P0C7U0 828 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 VSIG8P0DPA2 414 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 CTSEP14091 401 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TSHRP16473 764 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 AMY2BP19961 511 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 KELP23276 732 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 CCNCP24863 283 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 MAN1A1P33908 653 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TRIM23P36406 574 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ARHGAP25P42331 645 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 MMP13P45452 471 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 HK3P52790 923 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 IRF9Q00978 393 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 GALNT2Q10471 571 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 CDK5R2Q13319 367 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 DPYSL3Q14195 570 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ELOCQ15369 112 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 NR0B2Q15466 257 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 DEFB133Q30KQ1 61 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ANKRD20A8PQ5CZ79 823 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TIGD7Q6NT04 549 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ESRP1Q6NXG1 681 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ENPP7Q6UWV6 458 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 KDM7AQ6ZMT4 941 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 NDUFAF2Q8N183 169 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 MIER2Q8N344 545 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 PGBD5Q8N414 524 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ZBTB34Q8NCN2 500 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 IFI44Q8TCB0 444 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 GRAMD1AQ96CP6 724 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 SCRN2Q96FV2 425 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 NSMCE3Q96MG7 304 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TSGA13Q96PP4 275 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF670Q9BS34 389 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 LRRC61Q9BV99 259 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 TSPY26PQ9H489 355 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 DEF6Q9H4E7 631 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 NOD2Q9HC29 1040 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 AMACRQ9UHK6 382 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 FBXL7Q9UJT9 491 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 PPIL1Q9Y3C6 166 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 DGKBQ9Y6T7 804 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 U3KQA8 63 aa9.81□□□□□ -0.84
HNRNPC-228ENST00000557033 MYLKQ15746 1914 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 PSMD11O00231 422 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CACNB4O00305 520 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 MATN3O15232 486 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF205O95201 554 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 PRKCGP05129 697 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CD48P09326 243 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 KRT10P13645 584 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 GARSP41250 739 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CLDN6P56747 220 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 KIAA1024LP59773 190 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 SRP54P61011 504 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 SEMG2Q02383 582 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 C1orf61Q13536 156 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 LLGL1Q15334 1064 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 GPR19Q15760 415 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 IFI16Q16666 785 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CDKN3Q16667 212 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 ALG11Q2TAA5 492 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 ARMC12Q5T9G4 340 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 NCBP2-AS2Q69YL0 99 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 PNCKQ6P2M8 343 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 GKN2Q86XP6 184 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms