RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TMEM9Q9P0T7 183 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 EIF2B4Q9UI10 523 aaKnown RBP11.27□□□□□ -0.6
SRP54-213ENST00000556994 PCTPQ9UKL6 214 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 PSME2Q9UL46 239 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.6
SRP54-213ENST00000556994 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 CCL15-CCL14A0A0B4J2E2 113 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 A0A0U1RQS6 177 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 TMEM221A6NGB7 291 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 WASH4PA8MWX3 477 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 MAN1A2O60476 641 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ADAM23O75077 832 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 CLPXO76031 633 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 CHEK2O96017 543 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 RPS17P08708 135 aaKnown RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 ENO2P09104 434 aaPredicted RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 UROSP10746 265 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 CDH1P12830 882 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 RHOQP17081 205 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 AGXTP21549 392 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 PIGAP37287 484 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 HK3P52790 923 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 TBX4P57082 545 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ERVK-8P63133 956 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ACVR1Q04771 509 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 RAD51Q06609 339 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 AQP6Q13520 282 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 CCL15Q16663 113 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 FBXL22Q6P050 247 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ENPP6Q6UWR7 440 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 DLEU7Q6UYE1 221 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 THAP5Q7Z6K1 395 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 SCML4Q8N228 414 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 SIDT2Q8NBJ9 832 aaKnown RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 PNPT1Q8TCS8 783 aaKnown RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 FIG4Q92562 907 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 ISG20Q96AZ6 181 aaKnown RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 MYEOVQ96EZ4 313 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 BRINP2Q9C0B6 783 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 DERL2Q9GZP9 239 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 CCDC68Q9H2F9 335 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 SYTL2Q9HCH5 934 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 PRDM5Q9NQX1 630 aaPredicted RBP11.27□□□□□ -0.61
SRP54-213ENST00000556994 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 TAS2R13Q9NYV9 303 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 GMIPQ9P107 970 aa11.27□□□□□ -0.61
SRP54-213ENST00000556994 FAM234BA2RU67 622 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TOR1BO14657 336 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 OR1I1O60431 355 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 HTR1AP08908 422 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 G6PDP11413 515 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PRKACGP22612 351 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RPL9P32969 192 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 OPRL1P41146 370 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 HTR6P50406 440 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TSPY1Q01534 308 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PRKG2Q13237 762 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 NKG7Q16617 165 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RGS21Q2M5E4 152 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SLC39A12Q504Y0 691 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PDCD4Q53EL6 469 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 GTF2IRD2BQ6EKJ0 949 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 BEND5Q7L4P6 421 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 GTF2IRD2Q86UP8 949 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TMCO5AQ8N6Q1 288 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 GPR150Q8NGU9 434 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 BRSK1Q8TDC3 778 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TSPEARQ8WU66 669 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 EEF1AKMT1Q8WVE0 214 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TRUB1Q8WWH5 349 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 C1orf74Q96LT6 269 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SARS2Q9NP81 518 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 CD274Q9NZQ7 290 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 GNPTGQ9UJJ9 305 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 SPO11Q9Y5K1 396 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 DOCK4Q8N1I0 1966 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 G3V2T6 193 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 TSPAN3O60637 253 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 RAMP2O60895 175 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 NIPSNAP2O75323 286 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 KATNA1O75449 491 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 NDUFS3O75489 264 aa11.26□□□□□ -0.61
SRP54-213ENST00000556994 JUNBP17275 347 aaPredicted RBP11.26□□□□□ -0.61
SRP54-213ENST00000556994 CDH3P22223 829 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms