RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NPWQ8N729 165 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CNTD1Q8N815 330 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ANKRD42Q8N9B4 389 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 BANPQ8N9N5 519 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CCDC197Q8NCU1 140 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GABPB2Q8TAK5 448 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 MGARPQ8TDB4 240 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ACMSDQ8TDX5 336 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ATP2A3Q93084 1043 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PAWRQ96IZ0 340 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 CELF6Q96J87 481 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 CABS1Q96KC9 395 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ZNF599Q96NL3 588 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 RPRD1AQ96P16 312 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 IL12RB2Q99665 862 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PAIP2Q9BPZ3 127 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 CPPED1Q9BRF8 314 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 WDR83Q9BRX9 315 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 HERC2P3Q9BVR0 1158 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PITPNM3Q9BZ71 974 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 IQCGQ9H095 443 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 SLC25A51Q9H1U9 297 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MAGEH1Q9H213 219 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CYP4F11Q9HBI6 524 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GLOD4Q9HC38 313 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CASS4Q9NQ75 786 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ENTPD7Q9NQZ7 604 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 VPS45Q9NRW7 570 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TMEM248Q9NWD8 314 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 NSMCE4AQ9NXX6 385 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 KCMF1Q9P0J7 381 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TXNDC16Q9P2K2 825 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 UXTQ9UBK9 157 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 CTNNAL1Q9UBT7 734 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 DCDC2Q9UHG0 476 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 VANGL2Q9ULK5 521 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MAGED2Q9UNF1 606 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 ASB3Q9Y575 518 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ARID2Q68CP9 1835 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CDH23Q9H251 3354 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 TRIM43BA6NCK2 446 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 TRIM49D1C9J1S8 452 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 F5H5T6 163 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 COPEO14579 308 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 BIRC5O15392 142 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ADAM12O43184 909 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ACSL4O60488 711 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SPAG7O75391 227 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CLDN11O75508 207 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SOAT2O75908 522 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 USP1O94782 785 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 APOL3O95236 402 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SEC24AO95486 1093 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 VNN2O95498 520 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ASMTLO95671 621 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CXCL14O95715 111 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 C1RP00736 705 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 EPOP01588 193 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 C1QAP02745 245 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 URODP06132 367 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CSF2RAP15509 400 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CREB1P16220 341 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 HMGA1P17096 107 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 RPL17P18621 184 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 ATF6P18850 670 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ADRA1DP25100 572 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ALDH3A1P30838 453 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 OR1E1P30953 314 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 APOBEC3AP31941 199 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 CRHR1P34998 444 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SPRP35270 261 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 PLA2G5P39877 138 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 KIR2DL3P43628 341 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 POLD2P49005 469 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 WDR5P61964 334 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 PDE1BQ01064 536 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 IL10RBQ08334 325 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZBTB17Q13105 803 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZNF177Q13360 481 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 MPP3Q13368 585 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MTM1Q13496 603 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SERINC3Q13530 473 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RFTN1Q14699 578 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 CRYMQ14894 314 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 POLD3Q15054 466 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 LRRC26Q2I0M4 334 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ANKRD20A4Q4UJ75 823 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RNF187Q5TA31 235 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 PIK3R6Q5UE93 754 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RAP1GAP2Q684P5 730 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 UNQ6494/PRO21346Q6UXR6 183 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RANBP10Q6VN20 620 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 KYAT3Q6YP21 454 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZNF783Q6ZMS7 281 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CCDC121Q6ZUS5 278 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CCDC149Q6ZUS6 474 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 SH2D5Q6ZV89 423 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZNF534Q76KX8 674 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MARK2Q7KZI7 788 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms