RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ASB8Q9H765 288 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 PADI4Q9UM07 663 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 TCAF1Q9Y4C2 921 aa9.52□□□□□ -0.89
SRP54-210ENST00000556380 RP1P56715 2156 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 CCDC188H7C350 402 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 AP3B1O00203 1094 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 TP73O15350 636 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 WIPF1O43516 503 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 AVILO75366 819 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 RFPL3O75679 317 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 GAS8O95995 478 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 GP1BAP07359 652 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 CDK4P11802 303 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 MLNP12872 115 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 MGAT1P26572 445 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 FOXN2P32314 431 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 PAFAH1B1P43034 410 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 MAGEA3P43357 314 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 CRADDP78560 199 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 DAB2P98082 770 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 SEPT6Q14141 434 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 HLTFQ14527 1009 aaKnown RBP eCLIP9.51□□□□□ -0.89
SRP54-210ENST00000556380 ARMC3Q5W041 872 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 SLC30A9Q6PML9 568 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 DHRS13Q6UX07 377 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 XKR5Q6UX68 686 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 CHST15Q7LFX5 561 aaPredicted RBP9.51□□□□□ -0.89
SRP54-210ENST00000556380 TMPRSS7Q7RTY8 843 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 EFL1Q7Z2Z2 1120 aaKnown RBP9.51□□□□□ -0.89
SRP54-210ENST00000556380 LRRTM4Q86VH4 590 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 BPHLQ86WA6 291 aaPredicted RBP9.51□□□□□ -0.89
SRP54-210ENST00000556380 KLHL7Q8IXQ5 586 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 NAGSQ8N159 534 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
SRP54-210ENST00000556380 SPATA4Q8NEY3 305 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 IFI44Q8TCB0 444 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 GLMNQ92990 594 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 HDAC10Q969S8 669 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 ULK4Q96C45 1275 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 TIMM29Q9BSF4 260 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 KIFC1Q9BW19 673 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 IL22Q9GZX6 179 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 MRM3Q9HC36 420 aaKnown RBP9.51□□□□□ -0.89
SRP54-210ENST00000556380 CHRAC1Q9NRG0 131 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 TREX1Q9NSU2 369 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 BFARQ9NZS9 450 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 SIRPGQ9P1W8 387 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 GULP1Q9UBP9 304 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 DOLKQ9UPQ8 538 aa9.51□□□□□ -0.89
SRP54-210ENST00000556380 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
SRP54-210ENST00000556380 ASPMQ8IZT6 3477 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CCDC78A2IDD5 438 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CPED1A4D0V7 1026 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 OR51F1A6NGY5 319 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 KMOO15229 486 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CASC3O15234 703 aaKnown RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 HYAL3O43820 417 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 OPA1O60313 960 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 POP7O75817 140 aaKnown RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 ACP5P13686 325 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 PNLIPP16233 465 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZNF7P17097 686 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 ITGALP20701 1170 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ACRV1P26436 265 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ARNTP27540 789 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ACTR1BP42025 376 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 TERF1P54274 439 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ACTR1AP61163 376 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 E2F1Q01094 437 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 CACNG1Q06432 222 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 PPP1R7Q15435 360 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 DBN1Q16643 649 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZNF658BQ4V348 819 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 C14orf28Q4W4Y0 310 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 PERM1Q5SV97 790 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CDCP2Q5VXM1 449 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 IYDQ6PHW0 289 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 TMEM220Q6QAJ8 160 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SYDE1Q6ZW31 735 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZNF572Q7Z3I7 529 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SERPINA9Q86WD7 417 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 CACTIN-AS1Q8N1I8 211 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 MPP5Q8N3R9 675 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ARL14Q8N4G2 192 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 PPHLN1Q8NEY8 458 aaKnown RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 GDAP1Q8TB36 358 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 NAT14Q8WUY8 206 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 HEXDCQ8WVB3 486 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 PATE1Q8WXA2 126 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SGF29Q96ES7 293 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 RUNDC3BQ96NL0 473 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SERPINB12Q96P63 405 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms