RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 PDZK1P1A8MUH7 402 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 CCL22O00626 93 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 B4GAT1O43505 415 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ZSCAN5DPP0CG00 497 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 RALBP11234 206 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 MC4RP32245 332 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 MLLT3P42568 568 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 KCNJ1P48048 391 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 UBE2IP63279 158 aaKnown RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 GPLD1P80108 840 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ZFP36L1Q07352 338 aaKnown RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 SQSTM1Q13501 440 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 AMZ1Q400G9 498 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ABRAXAS1Q6UWZ7 409 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 GSTA5Q7RTV2 222 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 PIM3Q86V86 326 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 HEXDCQ8WVB3 486 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 SH3KBP1Q96B97 665 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ZNF578Q96N58 590 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 SLC38A3Q99624 504 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 COPS8Q99627 209 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 DPYSL5Q9BPU6 564 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 NUDT22Q9BRQ3 303 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 CASS4Q9NQ75 786 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 WASH6PQ9NQA3 447 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 KCNK4Q9NYG8 393 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 CPNE7Q9UBL6 633 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 DNMT3AQ9Y6K1 912 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-206ENST00000556375 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
SLIRP-206ENST00000556375 IGLV3-16A0A075B6K0 115 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TRBV23OR9-2A0A075B6M9 112 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 HEATR9A2RTY3 570 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 LILRA5A6NI73 299 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CFAP99D6REC4 459 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CES2O00748 559 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 PLD2O14939 933 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TLX3O43711 291 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 DUX1O43812 170 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 POP7O75817 140 aaKnown RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 XRCC1P18887 633 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 IDSP22304 550 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CD1CP29017 333 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CSF2RBP32927 897 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 GRIA1P42261 906 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 EPHA4P54764 986 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 BASP1P80723 227 aaKnown RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CACNG1Q06432 222 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 SKIDA1Q1XH10 827 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 BCL7AQ4VC05 210 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CCDC38Q502W7 563 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 ZRANB3Q5FWF4 1079 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 FNBP1LQ5T0N5 605 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TMEM220Q6QAJ8 160 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TMPRSS9Q7Z410 1059 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 ZNF761Q86XN6 746 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 PEX13Q92968 403 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 DCUN1D1Q96GG9 259 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 MS4A14Q96JA4 679 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 EPB41L1Q9H4G0 881 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 RDH14Q9HBH5 336 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 THSD1Q9NS62 852 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-206ENST00000556375 RIMKLBQ9ULI2 386 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 SNX12Q9UMY4 172 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 CFAP47Q6ZTR5 3102 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
SLIRP-206ENST00000556375 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 A0A087WV48 116 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PMS2P1A4D2B8 440 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 AP3B1O00203 1094 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 SGTAO43765 313 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 VIPP01282 170 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ITGA2BP08514 1039 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 BRAFP15056 766 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 TPSB2P20231 275 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ADRA1DP25100 572 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 ACRV1P26436 265 aa11.32□□□□□ -0.6
SLIRP-206ENST00000556375 RPL10P27635 214 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 RBMS1P29558 406 aaKnown RBP11.32□□□□□ -0.6
SLIRP-206ENST00000556375 PBLDP30039 288 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms