RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZNF514Q96K75 400 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 TTC25Q96NG3 672 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 TBC1D10AQ9BXI6 508 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 ARFGAP3Q9NP61 516 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 GEMIN8Q9NWZ8 242 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 UBP1Q9NZI7 540 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 OGFRQ9NZT2 677 aa12.49□□□□□ -0.41
HNRNPC-221ENST00000555883 GOLGA6L3A6NEY3 463 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 A8MU76 341 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PDZK1P1A8MUH7 402 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 POLR1CO15160 346 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 MTX2O75431 263 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 ANXA9O76027 345 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 STK17BO94768 372 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 DLGAP3O95886 979 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 TNNT1P13805 278 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PTPN7P35236 360 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 HALP42357 657 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 CAPZBP47756 277 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 IL11RAQ14626 422 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 SPA17Q15506 151 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 SNAP47Q5SQN1 464 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 KAZNQ674X7 775 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 CYB5D1Q6P9G0 228 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 GLT6D1Q7Z4J2 308 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 ZC3H18Q86VM9 953 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PPP1R2P1Q96PQ5 205 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 FSD1LQ9BXM9 530 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 GBA3Q9H227 469 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PKP3Q9Y446 797 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-221ENST00000555883 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 GAPDHSO14556 408 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 PYGMP11217 842 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 FECHP22830 423 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 CTNNA1P35221 906 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 CYLC1P35663 651 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 STAT5AP42229 794 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 MAPK9P45984 424 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 GEMP55040 296 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 GFERP55789 205 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 MC1RQ01726 317 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 NFATC3Q12968 1075 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 NOMO1Q15155 1222 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 ITPRIPL1Q6GPH6 555 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 AMZ2Q86W34 360 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 TRAPPC5Q8IUR0 188 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 ESX1Q8N693 406 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 GDAP1Q8TB36 358 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 JPH3Q8WXH2 748 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 KLHL6Q8WZ60 621 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 CXorf40BQ96DE9 158 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 ZDHHC12Q96GR4 267 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 PANX2Q96RD6 677 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 FAM117AQ9C073 453 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 GPN2Q9H9Y4 310 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 BPIFA1Q9NP55 256 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 RSPH14Q9UHP6 348 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 DNAJC16Q9Y2G8 782 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 PCDHA3Q9Y5H8 950 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 HEMK1Q9Y5R4 338 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
HNRNPC-221ENST00000555883 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 C5orf60A6NFR6 353 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 SLC28A2O43868 658 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 AMD1P17707 334 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 RPL10P27635 214 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 CHRNA4P43681 627 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 MARCKSL1P49006 195 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 CYP4F2P78329 520 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 PDE1BQ01064 536 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 GPR18Q14330 331 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 TAF1AQ15573 450 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 FAM182AQ5T1J6 154 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 KLHL35Q6PF15 583 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 RANBP10Q6VN20 620 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 TIPARPQ7Z3E1 657 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 BEND7Q8N7W2 519 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 ZFPM2Q8WW38 1151 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 KRT35Q92764 455 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 CTRCQ99895 268 aa12.46□□□□□ -0.41
HNRNPC-221ENST00000555883 GOLPH3Q9H4A6 298 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms