RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 DDHD1Q8NEL9 900 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 ZNF398Q8TD17 642 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 BBC3Q96PG8 261 aaPredicted RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 TBC1D10AQ9BXI6 508 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 FOXJ2Q9P0K8 574 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 R3HDM2Q9Y2K5 976 aaKnown RBP18.12■□□□□ 0.49
NEDD1-208ENST00000555806 KCTD3Q9Y597 815 aa18.12■□□□□ 0.49
NEDD1-208ENST00000555806 TCRBV7S2A1N4TA0A589 114 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 A8MU76 341 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 CRTAMO95727 393 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 MSH3P20585 1137 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 CA5AP35218 305 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 DRG2P55039 364 aaKnown RBP18.11■□□□□ 0.49
NEDD1-208ENST00000555806 VAC14Q08AM6 782 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 C11orf96Q7Z7L8 435 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 FAM129CQ86XR2 697 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 ASB8Q9H765 288 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 KLHL3Q9UH77 587 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 FKBPLQ9UIM3 349 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 ACSL6Q9UKU0 697 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 IGSF10Q6WRI0 2623 aa18.11■□□□□ 0.49
NEDD1-208ENST00000555806 LILRA5A6NI73 299 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 OR2AG2A6NM03 316 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 C9orf172C9J069 976 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 ARHGAP6O43182 974 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 LIPCP11150 499 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 XRCC1P18887 633 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 PBLDP30039 288 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 SLC19A1P41440 591 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 CTSCP53634 463 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 GDF10P55107 478 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TMPRSS15P98073 1019 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 PDE1BQ01064 536 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TGIF1Q15583 401 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 LONRF2Q1L5Z9 754 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 PARP6Q2NL67 630 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM220Q6QAJ8 160 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 WDR74Q6RFH5 385 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 CCDC81Q6ZN84 652 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 AMZ2Q86W34 360 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 ZFAND4Q86XD8 727 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TAB3Q8N5C8 712 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 OR13C4Q8NGS5 318 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 SLC35B2Q8TB61 432 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 CXorf40BQ96DE9 158 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TAAR9Q96RI9 348 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM121Q9BTD3 319 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 EPB41L1Q9H4G0 881 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 POT1Q9NUX5 634 aa18.1■□□□□ 0.49
NEDD1-208ENST00000555806 ZNF624Q9P2J8 865 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-208ENST00000555806 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
NEDD1-208ENST00000555806 PRR19A6NJB7 356 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 OR52A4PA6NMU1 304 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 EFCAB7A8K855 629 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 KCNJ13O60928 360 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 POP7O75817 140 aaKnown RBP18.09■□□□□ 0.49
NEDD1-208ENST00000555806 SRP72O76094 671 aaKnown RBP18.09■□□□□ 0.49
NEDD1-208ENST00000555806 METTL18O95568 372 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 FGF3P11487 239 aaPredicted RBP18.09■□□□□ 0.49
NEDD1-208ENST00000555806 CD82P27701 267 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 HALP42357 657 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 P3H1Q32P28 736 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 FNBP1LQ5T0N5 605 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 AGAP9Q5VTM2 703 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 ABRAXAS1Q6UWZ7 409 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 WASH2PQ6VEQ5 465 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 TMEM26Q6ZUK4 368 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 DET1Q7L5Y6 550 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 ATG4AQ8WYN0 398 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 ART4Q93070 314 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 CCNL2Q96S94 520 aaPredicted RBP18.09■□□□□ 0.49
NEDD1-208ENST00000555806 LRRC40Q9H9A6 602 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 UCK1Q9HA47 277 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 WASH6PQ9NQA3 447 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 CRLS1Q9UJA2 301 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 PCDHB11Q9Y5F2 797 aa18.09■□□□□ 0.49
NEDD1-208ENST00000555806 BRAFP15056 766 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 TYRP1P17643 537 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 AMD1P17707 334 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 ZNF140P52738 457 aaPredicted RBP18.08■□□□□ 0.48
NEDD1-208ENST00000555806 DENND5AQ6IQ26 1287 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 KLHDC8BQ8IXV7 354 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 PMEPA1Q969W9 287 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
NEDD1-208ENST00000555806 B3GNT4Q9C0J1 378 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 ARNT2Q9HBZ2 717 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 OCIAD1Q9NX40 245 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 SLC39A1Q9NY26 324 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 PDP2Q9P2J9 529 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 SSUH2Q9Y2M2 353 aa18.08■□□□□ 0.48
NEDD1-208ENST00000555806 K7ENP7 123 aa18.07■□□□□ 0.48
NEDD1-208ENST00000555806 UBXN7O94888 489 aa18.07■□□□□ 0.48
NEDD1-208ENST00000555806 ITGALP20701 1170 aa18.07■□□□□ 0.48
NEDD1-208ENST00000555806 HADHAP40939 763 aa18.07■□□□□ 0.48
NEDD1-208ENST00000555806 DMPKQ09013 629 aa18.07■□□□□ 0.48
NEDD1-208ENST00000555806 MSLNQ13421 630 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms