RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TCF25Q9BQ70 676 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 SDR39U1Q9NRG7 319 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-207ENST00000555497 HECAQ9UBI9 543 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-207ENST00000555497 CD300AQ9UGN4 299 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 CROTQ9UKG9 612 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 A6NHS1 94 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 GOLGA8CPA6NN73 597 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 UROSP10746 265 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 AQP4P55087 323 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 ERVPABLB-1P60509 514 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 VPS26BQ4G0F5 336 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 XKR7Q5GH72 579 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 MICAL1Q8TDZ2 1067 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 CLP1Q92989 425 aaKnown RBP23.98■■□□□ 1.43
TMEM260-207ENST00000555497 ZDHHC7Q9NXF8 308 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 NUDT4Q9NZJ9 180 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 APPL1Q9UKG1 709 aa23.98■■□□□ 1.43
TMEM260-207ENST00000555497 MOSPD3O75425 235 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 RFPL2O75678 378 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 SLC25A14O95258 325 aaPredicted RBP23.97■■□□□ 1.43
TMEM260-207ENST00000555497 TRIM16O95361 564 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 TRIM25Q14258 630 aaKnown RBP23.97■■□□□ 1.43
TMEM260-207ENST00000555497 C22orf39Q6P5X5 142 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 HACD2Q6Y1H2 254 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 RFLNAQ6ZTI6 216 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 GPRIN3Q6ZVF9 776 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 LILRA2Q8N149 483 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 GATA6Q92908 595 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 ASB9Q96DX5 294 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 NUSAP1Q9BXS6 441 aaKnown RBP23.97■■□□□ 1.43
TMEM260-207ENST00000555497 SPAG4Q9NPE6 437 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 IL23AQ9NPF7 189 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 TMEM181Q9P2C4 612 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 SUCOQ9UBS9 1254 aaKnown RBP23.97■■□□□ 1.43
TMEM260-207ENST00000555497 GNPTGQ9UJJ9 305 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 TMCO1Q9UM00 188 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 HS3ST2Q9Y278 367 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 GPR45Q9Y5Y3 372 aa23.97■■□□□ 1.43
TMEM260-207ENST00000555497 MTCL1Q9Y4B5 1905 aaKnown RBP23.97■■□□□ 1.43
TMEM260-207ENST00000555497 CYBBP04839 570 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 OGFRL1Q5TC84 451 aaPredicted RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 SLC52A3Q9NQ40 469 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 C6orf203Q9P0P8 240 aaPredicted RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 SLCO3A1Q9UIG8 710 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 GLUD1P00367 558 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 SPAM1P38567 509 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 NAA20P61599 178 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 SNRPD1P62314 119 aaKnown RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 MRPS35P82673 323 aaKnown RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 TEAD2Q15562 447 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 LETMD1Q6P1Q0 360 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 TMEM154Q6P9G4 183 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 METTL3Q86U44 580 aaKnown RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 CDYL2Q8N8U2 506 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 MYLIPQ8WY64 445 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 ECHDC3Q96DC8 303 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 TEX37Q96LM6 180 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 LYSMD1Q96S90 227 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 C19orf43Q9BQ61 176 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 NOL11Q9H8H0 719 aaKnown RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 CXXC1Q9P0U4 656 aaPredicted RBP23.96■■□□□ 1.43
TMEM260-207ENST00000555497 CRLS1Q9UJA2 301 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 RIMS3Q9UJD0 308 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 PLXNB3Q9ULL4 1909 aa23.96■■□□□ 1.43
TMEM260-207ENST00000555497 YBX1P67809 324 aaKnown RBP23.95■■□□□ 1.42
TMEM260-207ENST00000555497 PLPP4Q5VZY2 271 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 OGFOD2Q6N063 350 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 FRA10AC1Q70Z53 315 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 SPATA24Q86W54 205 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 ZNF382Q96SR6 550 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 SUV39H2Q9H5I1 410 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 COPS7BQ9H9Q2 264 aaPredicted RBP23.95■■□□□ 1.42
TMEM260-207ENST00000555497 IL1RL2Q9HB29 575 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 ELOVL2Q9NXB9 296 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 ST14Q9Y5Y6 855 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 PRSS51A0A1B0GVH4 220 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 DNAJA2O60884 412 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 VPS4BO75351 444 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 LHCGRP22888 699 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 SLC7A2P52569 658 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 PCBP2Q15366 365 aaKnown RBP eCLIP23.95■■□□□ 1.42
TMEM260-207ENST00000555497 LRRC66Q68CR7 880 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 GRAMD4Q6IC98 578 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 ZFP1Q6P2D0 407 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 DPY19L3Q6ZPD9 716 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 ADAMTSL2Q86TH1 951 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 CBARPQ8N350 705 aaPredicted RBP23.95■■□□□ 1.42
TMEM260-207ENST00000555497 SCRN2Q96FV2 425 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 LINC00597Q9H2U6 94 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 BCAP29Q9UHQ4 241 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 NOTCH4Q99466 2003 aa23.95■■□□□ 1.42
TMEM260-207ENST00000555497 DPPA5A6NC42 116 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 NEDD8-MDP1E9PL57 170 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 OR7A17O14581 309 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 FFAR2O15552 330 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 MATN4O95460 622 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 PTSQ03393 145 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 GPRC6AQ5T6X5 926 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 GOLGA7Q7Z5G4 137 aa23.94■■□□□ 1.42
TMEM260-207ENST00000555497 ADGRG2Q8IZP9 1017 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms