RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZFYVE27Q5T4F4 411 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 TIGD7Q6NT04 549 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 WDR74Q6RFH5 385 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 ZNF765Q7L2R6 523 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 CROCCP2Q86T23 111 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 PHYKPLQ8IUZ5 450 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 CCHCR1Q8TD31 782 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 STARD8Q92502 1023 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 RNF31Q96EP0 1072 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 SCARF2Q96GP6 870 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 SLC45A3Q96JT2 553 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 ZPBPQ9BS86 351 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 HERPUD2Q9BSE4 406 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 TDRD1Q9BXT4 1180 aaKnown RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 CAPS2Q9BXY5 557 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 ISCUQ9H1K1 167 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 RASSF4Q9H2L5 321 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 TRIT1Q9H3H1 467 aaKnown RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 PCDH18Q9HCL0 1135 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 SARS2Q9NP81 518 aaKnown RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 PKD2L2Q9NZM6 624 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
TDP1-208ENST00000553989 ANAPC7Q9UJX3 599 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 ANAPC2Q9UJX6 822 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 PILRAQ9UKJ1 303 aa8.74□□□□□ -1.01
TDP1-208ENST00000553989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 LOC101059948A0A1B0GTJ6 334 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 GOLGA6L10A6NI86 522 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 HMGB1P1B2RPK0 211 aaPredicted RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 MFSD11O43934 449 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 MTA2O94776 668 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 EML2O95834 649 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 SLC4A1P02730 911 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 TCN2P20062 427 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 CASRP41180 1078 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 GARSP41250 739 aaKnown RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 STC1P52823 247 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 EPHA4P54764 986 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 MC2RQ01718 297 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 ABHD18Q0P651 414 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 UBAP2LQ14157 1087 aaKnown RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 IGFBP7Q16270 282 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 HADHQ16836 314 aaKnown RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 LACTB2Q53H82 288 aaPredicted RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 TXNRD3NBQ6F5E7 133 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 MICALCLQ6ZW33 695 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 LYSMD3Q7Z3D4 306 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 PLXDC1Q8IUK5 500 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 LRRC49Q8IUZ0 686 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 TRIM48Q8IWZ4 208 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 CBARPQ8N350 705 aaPredicted RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 BMPERQ8N8U9 685 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 AVL9Q8NBF6 648 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 TEKT4Q8WW24 435 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 APOBEC4Q8WW27 367 aaKnown RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 COX14Q96I36 57 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 ULBP3Q9BZM4 244 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 PCDH9Q9HC56 1237 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 APMAPQ9HDC9 416 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 FAM114A2Q9NRY5 505 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 RBM22Q9NW64 420 aaKnown RBP eCLIP8.73□□□□□ -1.01
TDP1-208ENST00000553989 ANKMY1Q9P2S6 941 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 TBC1D29Q9UFV1 150 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 IP6K2Q9UHH9 426 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 AMFRQ9UKV5 643 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 PPIL1Q9Y3C6 166 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 PCDHB3Q9Y5E6 796 aa8.73□□□□□ -1.01
TDP1-208ENST00000553989 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
TDP1-208ENST00000553989 MAST4O15021 2626 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 TLN1Q9Y490 2541 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 KIR2DS5A0A0G2JLQ3 304 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 A0A0G2JNG1 304 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 KIR2DS3K7RE56 304 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 PGRMC1O00264 195 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 GRID2O43424 1007 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 FZD6O60353 706 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 DNAJC6O75061 913 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RASSF9O75901 435 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 TMEM253P0C7T8 217 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 F3P13726 295 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 AMD1P17707 334 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 CES1P23141 567 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 CXCR5P32302 372 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 DLSTP36957 453 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 SEPHS1P49903 392 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 EMP3P54852 163 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 DRG2P55039 364 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 GUCY2DQ02846 1103 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 SLC25A11Q02978 314 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 SRSF1Q07955 248 aaKnown RBP eCLIP8.72□□□□□ -1.01
TDP1-208ENST00000553989 GALNT2Q10471 571 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 KIR2DS5Q14953 304 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 SEPT7Q16181 437 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms