RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 FOXK1P85037 733 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 PDE1BQ01064 536 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 CDK18Q07002 472 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 TUBB3Q13509 450 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 DNASE1L3Q13609 305 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 UBAP2LQ14157 1087 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 GPR18Q14330 331 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 IL11RAQ14626 422 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 DNTTIP2Q5QJE6 756 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 ASB18Q6ZVZ8 466 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 LUZP1Q86V48 1076 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 CPNE8Q86YQ8 564 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 PQLC3Q8N755 202 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 GPR26Q8NDV2 337 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 FAM71BQ8TC56 605 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 RSC1A1Q92681 617 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 RNF157Q96PX1 679 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 WDR24Q96S15 920 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 SLC25A51Q9H1U9 297 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 ZNF768Q9H5H4 540 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 MAGEE1Q9HCI5 957 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 BPIFA1Q9NP55 256 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 SIDT1Q9NXL6 827 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 RARRES3Q9UL19 164 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 G3BP2Q9UN86 482 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 CACNA1DQ01668 2161 aa9.74□□□□□ -0.85
ACTN1-210ENST00000553779 DIDO1Q9BTC0 2240 aaKnown RBP9.74□□□□□ -0.85
ACTN1-210ENST00000553779 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 UBA6A0AVT1 1052 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SYCE3A1L190 88 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 F5H423 210 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SPOPO43791 374 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 KIF1CO43896 1103 aaKnown RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 NDST3O95803 873 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 C9P02748 559 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 ZNF28P17035 718 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 NR1D1P20393 614 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SLC19A1P41440 591 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 CLCNKAP51800 687 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 XRCC4Q13426 336 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 KRT33BQ14525 404 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 GLT6D1Q7Z4J2 308 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PRSS42Q7Z5A4 293 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SEC14L1Q92503 715 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 FAF2Q96CS3 445 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 IMP4Q96G21 291 aaKnown RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 FSD1LQ9BXM9 530 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PACSIN1Q9BY11 444 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 FANCEQ9HB96 536 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 IMP3Q9NV31 184 aaKnown RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SOHLH2Q9NX45 425 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 UBP1Q9NZI7 540 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 IFNKQ9P0W0 207 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 MAP10Q9P2G4 905 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-210ENST00000553779 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PADI1Q9ULC6 663 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PSMD13Q9UNM6 376 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PLAAQ9Y263 795 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 PKP3Q9Y446 797 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 KCNMB2Q9Y691 235 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 CREBBPQ92793 2442 aa9.73□□□□□ -0.85
ACTN1-210ENST00000553779 CYSRT1A8MQ03 144 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 CHUKO15111 745 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 VPS4BO75351 444 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SPAG6O75602 509 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 CREG1O75629 220 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 MT-CYBP00156 380 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 GYPCP04921 128 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 BPIP17213 487 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SPAM1P38567 509 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 PGDP52209 483 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 RPS15P62841 145 aaKnown RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC10A2Q12908 348 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 IHHQ14623 411 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 IQCB1Q15051 598 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC18A3Q16572 532 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 CRTC2Q53ET0 693 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 TMTC4Q5T4D3 741 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 ZDHHC20Q5W0Z9 365 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 NPNTQ6UXI9 565 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 FAM151BQ6UXP7 276 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 B4GALNT4Q76KP1 1039 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 AMZ2Q86W34 360 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 TMEM126BQ8IUX1 230 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 FAM26EQ8N5C1 309 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC25A41Q8N5S1 370 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 PLD5Q8N7P1 536 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SPATA22Q8NHS9 363 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 BRSK1Q8TDC3 778 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 BLOC1S5Q8TDH9 187 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms