RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 LYSMD1Q96S90 227 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 SLC30A3Q99726 388 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 BBS2Q9BXC9 721 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 CPEB1Q9BZB8 566 aaKnown RBP15.16■□□□□ 0.02
ABCD4-218ENST00000553486 CLPBQ9H078 707 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 ASB8Q9H765 288 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 TNFRSF12AQ9NP84 129 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 NDE1Q9NXR1 346 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 DHRS7Q9Y394 339 aa15.16■□□□□ 0.02
ABCD4-218ENST00000553486 NPEPPSL1A6NEC2 478 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 NEDD8-MDP1E9PL57 170 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CDC7O00311 574 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 UBDO15205 165 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 KRT36O76013 467 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SIX3O95343 332 aaPredicted RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PABPC1P11940 636 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 TSPAN8P19075 237 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 EEF1DP29692 281 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SPAM1P38567 509 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 STK19P49842 368 aaPredicted RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CDH13P55290 713 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 TBL3Q12788 808 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SQLEQ14534 574 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 FUT11Q495W5 492 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 ACCSLQ4AC99 568 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CARD16Q5EG05 197 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PTRHD1Q6GMV3 140 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 GPSM1Q86YR5 675 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 RBFAQ8N0V3 343 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 KYQ8NBH2 561 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 EEF1AKMT1Q8WVE0 214 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 NXPE3Q969Y0 559 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PDLIM5Q96HC4 596 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SUV39H2Q9H5I1 410 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SARS2Q9NP81 518 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 MID1IP1Q9NPA3 183 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SPHK2Q9NRA0 654 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 GNPTGQ9UJJ9 305 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 RIF1Q5UIP0 2472 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 NOTCH4Q99466 2003 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 GLYATL1P3A0A0U1RQE8 302 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 A0A1W2PQ67 120 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 AIM2O14862 343 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 AZIN1O14977 448 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PI15O43692 258 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 KLK8O60259 260 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CDK14O94921 469 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 POP4O95707 220 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 TSPAN12O95859 305 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 GCKP35557 465 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 NBL1P41271 181 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CLCN7P51798 805 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SH3BP2P78314 561 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CLCQ05315 142 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 NFATC2Q13469 925 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 MAPRE2Q15555 327 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 GPR33Q49SQ1 333 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 CLEC6AQ6EIG7 209 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 TPRG1Q6ZUI0 275 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 USP45Q70EL2 814 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■□□□□ 8.7
ABCD4-218ENST00000553486 CPNE9Q8IYJ1 553 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 SLC44A3Q8N4M1 653 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 MARK4Q96L34 752 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 ZNF641Q96N77 438 aaPredicted RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 C1QTNF3Q9BXJ4 246 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 EFCAB1Q9HAE3 211 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 IL26Q9NPH9 171 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 WNT16Q9UBV4 365 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 IKZF3Q9UKT9 509 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PRPF19Q9UMS4 504 aaKnown RBP15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PPIL1Q9Y3C6 166 aa15.15■□□□□ 0.02
ABCD4-218ENST00000553486 PTPRZ1P23471 2315 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 ANKRD12Q6UB98 2062 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 TRBV5-4A0A0C4DH59 114 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 BNIP3LO60238 219 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 SNX2O60749 519 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 RPS17P08708 135 aaKnown RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 LAMP2P13473 410 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 BPIP17213 487 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 NUDT2P50583 147 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 ECT2LQ008S8 904 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 SLC34A1Q06495 639 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 LCP2Q13094 533 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 ZNF77Q15935 545 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 GEN1Q17RS7 908 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 GET4Q7L5D6 327 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 MYLK4Q86YV6 388 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 FBXW8Q8N3Y1 598 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 GIMAP7Q8NHV1 300 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 TRPC4APQ8TEL6 797 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 ECHDC3Q96DC8 303 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 OTUB2Q96DC9 234 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 C19orf60Q96EN9 201 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 SCRN2Q96FV2 425 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 SERPINI1Q99574 410 aa15.14■□□□□ 0.01
ABCD4-218ENST00000553486 TACO1Q9BSH4 297 aaKnown RBP15.14■□□□□ 0.01
ABCD4-218ENST00000553486 CRLS1Q9UJA2 301 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms